RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 TUBB4BP68371 445 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 EN1Q05925 392 aaPredicted RBP2.97□□□□□ -1.93
PCM1-222ENST00000524226 RAB3GAP1Q15042 981 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 NLGN1Q8N2Q7 840 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 SREK1Q8WXA9 508 aaKnown RBP2.97□□□□□ -1.93
PCM1-222ENST00000524226 XAGE2Q96GT9 111 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 ZNF594Q96JF6 807 aaPredicted RBP2.97□□□□□ -1.93
PCM1-222ENST00000524226 HAUS7Q99871 368 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 FERMT1Q9BQL6 677 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 DBNDD2Q9BQY9 259 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 PYM1Q9BRP8 204 aaKnown RBP2.97□□□□□ -1.93
PCM1-222ENST00000524226 PLA2G12BQ9BX93 195 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 TNMDQ9H2S6 317 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 SNX14Q9Y5W7 946 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 IVNS1ABPQ9Y6Y0 642 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 SALL3Q9BXA9 1300 aa2.97□□□□□ -1.93
PCM1-222ENST00000524226 ZBTB24O43167 697 aaPredicted RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 ECM2O94769 699 aaPredicted RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 CAVIN2O95810 425 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 TUBB4AP04350 444 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 PUM3Q15397 648 aaKnown RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 ARHGAP29Q52LW3 1261 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 EPHA10Q5JZY3 1008 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 CREB3L3Q68CJ9 461 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 RUFY3Q7L099 469 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 NLRP10Q86W26 655 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 BBXQ8WY36 941 aaPredicted RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 CNKSR1Q969H4 720 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 LSG1Q9H089 658 aaKnown RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 SPC25Q9HBM1 224 aa2.96□□□□□ -1.93
PCM1-222ENST00000524226 TLR7Q9NYK1 1049 aaKnown RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 CGNQ9P2M7 1197 aaKnown RBP2.96□□□□□ -1.93
PCM1-222ENST00000524226 LDHCP07864 332 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 CCDC175P0C221 793 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 MCM5P33992 734 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 PABPC4Q13310 644 aaKnown RBP eCLIP2.96□□□□□ -1.94
PCM1-222ENST00000524226 TICAM2Q86XR7 235 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.96□□□□□ -1.944e-8■□□□□ 10
PCM1-222ENST00000524226 LRRC45Q96CN5 670 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 UPF3BQ9BZI7 483 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 ZC3H12CQ9C0D7 883 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 CSADQ9Y600 493 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 COL16A1Q07092 1604 aaPredicted RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 FERP16591 822 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 MAP3K12Q12852 859 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 SPA17Q15506 151 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 FOXD4L6Q3SYB3 417 aaPredicted RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 LRRC24Q50LG9 513 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 FOXD4L3Q6VB84 417 aaPredicted RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 KBTBD3Q8NAB2 608 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 CCDC102AQ96A19 550 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 INTS4Q96HW7 963 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 RNF181Q9P0P0 153 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 DOT1LQ8TEK3 1739 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 UBR2Q8IWV8 1755 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 AK9Q5TCS8 1911 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 SLC27A2O14975 620 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 CTAGE5O15320 804 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 IDH1O75874 414 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 ZBTB7AO95365 584 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 PAFAH1B1P43034 410 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 FAM227BQ96M60 508 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 NEK1Q96PY6 1258 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 DBNLQ9UJU6 430 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 WNK3Q9BYP7 1800 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 ABCC12Q96J65 1359 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 ZNF609O15014 1411 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 CCDC85CA6NKD9 419 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 KIF5CO60282 957 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 USO1O60763 962 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 ZNF76P36508 570 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 TRIM28Q13263 835 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 HLFQ16534 295 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 FKBP15Q5T1M5 1219 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 KIAA1328Q86T90 577 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 ZGPATQ8N5A5 531 aaKnown RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 EHBP1Q8NDI1 1231 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 LBHD1Q9BQE6 289 aaPredicted RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 TANGO6Q9C0B7 1094 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 NBPF3Q9H094 633 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 GPHNQ9NQX3 736 aaPredicted RBP2.96□□□□□ -1.94
PCM1-222ENST00000524226 PIM2Q9P1W9 311 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 LTBP4Q8N2S1 1624 aa2.96□□□□□ -1.94
PCM1-222ENST00000524226 RFX5P48382 616 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 AK2P54819 239 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 SKIV2LQ15477 1246 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 PPP4R3BQ5MIZ7 849 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 DAAM2Q86T65 1068 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 KIF18AQ8NI77 898 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 LPIN2Q92539 896 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CUL5Q93034 780 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 GJD4Q96KN9 370 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 TSG101Q99816 390 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 RAB34Q9BZG1 259 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 GREM2Q9H772 168 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.95□□□□□ -1.94
PCM1-222ENST00000524226 NWD2Q9ULI1 1742 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 A0A0D9SFI3 127 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 SOCS7O14512 581 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PPIP5K2O43314 1243 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms