RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	KLF18	A0A0U1RQI7	1052 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	SYCE3	A1L190	88 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	SEMA3E	O15041	775 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	FOSB	P53539	338 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	DNM1	Q05193	864 aa	Known RBP	12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	LRSAM1	Q6UWE0	723 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	FERMT3	Q86UX7	667 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	TOMM22	Q9NS69	142 aa		12.63	□□□□□ -0.39
SPIDR-222	ENST00000524006	COL4A1	P02462	1669 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	ERICH2	A1L162	156 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	JAK2	O60674	1132 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	BCAM	P50895	628 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CCT2	P78371	535 aa	Known RBP	12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	ST5	P78524	1137 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	EXOSC10	Q01780	885 aa	Known RBP	12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CCDC173	Q0VFZ6	552 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	SCRN1	Q12765	414 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	SLC10A5	Q5PT55	438 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	NAA16	Q6N069	864 aa	Predicted RBP	12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	SYNE3	Q6ZMZ3	975 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CHST3	Q7LGC8	479 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CNBD1	Q8NA66	436 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CHAMP1	Q96JM3	812 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	SPATA32	Q96LK8	384 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	ZNF396	Q96N95	335 aa	Predicted RBP	12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	KRT23	Q9C075	422 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	RNF41	Q9H4P4	317 aa	Predicted RBP	12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	ABCF2	Q9UG63	623 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	CFAP45	Q9UL16	551 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	SLC4A4	Q9Y6R1	1079 aa		12.62	□□□□□ -0.39
SPIDR-222	ENST00000524006	MAGEB6P1	A0A0J9YX57	407 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	CYP7A1	P22680	504 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	RPS8	P62241	208 aa	Known RBP	12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	ALX1	Q15699	326 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	RPGR	Q92834	1020 aa	Known RBP	12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	TMEM87B	Q96K49	555 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	ARMT1	Q9H993	441 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	TMEM63C	Q9P1W3	806 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	CDK5RAP2	Q96SN8	1893 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	ELP1	O95163	1332 aa		12.61	□□□□□ -0.39
SPIDR-222	ENST00000524006	TCRBV5S4A2T	A0A5A2	114 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	CCDC69	A6NI79	296 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	PATL2	C9JE40	543 aa	Known RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	GYG1	P46976	350 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	MFSD6	Q6ZSS7	791 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	NSUN7	Q8NE18	718 aa	Known RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	BICD2	Q8TD16	824 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	STRBP	Q96SI9	672 aa	Known RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	NOL10	Q9BSC4	688 aa	Known RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	AGXT2	Q9BYV1	514 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	PANK2	Q9BZ23	570 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	ANGEL1	Q9UNK9	670 aa	Known RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	ZNF804B	A4D1E1	1349 aa		12.6	□□□□□ -0.39
SPIDR-222	ENST00000524006	GADD45B	O75293	160 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	PDIA3	P30101	505 aa	Known RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	METAP2	P50579	478 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	GNL2	Q13823	731 aa	Known RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	TRIM29	Q14134	588 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	TMEM67	Q5HYA8	995 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	IFNL3	Q8IZI9	196 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	FBXL16	Q8N461	479 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	SMARCC2	Q8TAQ2	1214 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	ARHGEF1	Q92888	912 aa	Known RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	C8orf76	Q96K31	380 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	MINPP1	Q9UNW1	487 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	LRRC37A	A6NMS7	1700 aa		12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	PDS5A	Q29RF7	1337 aa	Known RBP	12.59	□□□□□ -0.39
SPIDR-222	ENST00000524006	MYH1	P12882	1939 aa		12.58	□□□□□ -0.39
SPIDR-222	ENST00000524006		A0A0G2JLW4	131 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	GOLGA8A	A7E2F4	631 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006		B4E1Z4	1266 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	CHAF1A	Q13111	956 aa	Predicted RBP	12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	RRP12	Q5JTH9	1297 aa	Known RBP	12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	C3orf67	Q6ZVT6	689 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	GAS2L3	Q86XJ1	694 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	TBC1D10C	Q8IV04	446 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	MIGA1	Q8NAN2	632 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	CELF1	Q92879	486 aa	Known RBP	12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	UBAC1	Q9BSL1	405 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	BCL2L12	Q9HB09	334 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	NCOA5	Q9HCD5	579 aa	Known RBP	12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	ANKIB1	Q9P2G1	1089 aa		12.58	□□□□□ -0.4
SPIDR-222	ENST00000524006	SNAP23	O00161	211 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	IFIT3	O14879	490 aa	Known RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	ZBTB43	O43298	467 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	SLC3A2	P08195	630 aa	Known RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	HIBADH	P31937	336 aa	Known RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	REST	Q13127	1097 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	COL9A3	Q14050	684 aa	Predicted RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	AKNAD1	Q5T1N1	836 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	ATL3	Q6DD88	541 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	TMED8	Q6PL24	325 aa	Predicted RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	ZNF804A	Q7Z570	1209 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	DZIP1	Q86YF9	867 aa	Known RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	LCORL	Q8N3X6	602 aa		12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	ZNF526	Q8TF50	670 aa	Predicted RBP	12.57	□□□□□ -0.4
SPIDR-222	ENST00000524006	NUP62CL	Q9H1M0	184 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms