RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DLK2Q6UY11 383 aa15.29■□□□□ 0.04
VEGFA-225ENST00000523950 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
VEGFA-225ENST00000523950 BTDP43251 543 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-225ENST00000523950 CDC42EP5Q6NZY7 148 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 CERS3Q8IU89 383 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 ZNF384Q8TF68 577 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 NOL10Q9BSC4 688 aaKnown RBP15.28■□□□□ 0.04
VEGFA-225ENST00000523950 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 SCAF8Q9UPN6 1271 aaKnown RBP15.28■□□□□ 0.04
VEGFA-225ENST00000523950 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
VEGFA-225ENST00000523950 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 UNCXA6NJT0 531 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 BAG3O95817 575 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 HUNKP57058 714 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 HAUS7Q99871 368 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 IDI2Q9BXS1 227 aa15.27■□□□□ 0.04
VEGFA-225ENST00000523950 PIH1D3Q9NQM4 214 aaKnown RBP15.27■□□□□ 0.04
VEGFA-225ENST00000523950 MKRN1Q9UHC7 482 aaKnown RBP15.27■□□□□ 0.04
VEGFA-225ENST00000523950 MYH7P12883 1935 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-225ENST00000523950 ENTPD3O75355 529 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
VEGFA-225ENST00000523950 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
VEGFA-225ENST00000523950 PLCG2P16885 1265 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 MAP3K11Q16584 847 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 PRAMEF18Q5VWM3 479 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 JMYQ8N9B5 988 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 TEPSINQ96N21 525 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 SSC5DA1L4H1 1573 aa15.26■□□□□ 0.03
VEGFA-225ENST00000523950 FOCADQ5VW36 1801 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 ERC2O15083 957 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 CACNB3P54284 484 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 PPP4CP60510 307 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-225ENST00000523950 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
VEGFA-225ENST00000523950 ANTXR1Q9H6X2 564 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 PAG1Q9NWQ8 432 aa15.25■□□□□ 0.03
VEGFA-225ENST00000523950 COL2A1P02458 1487 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-225ENST00000523950 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
VEGFA-225ENST00000523950 GOLIM4O00461 696 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 VEGFBP49765 207 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 RHBDL3P58872 404 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 NBPF12Q5TAG4 269 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-225ENST00000523950 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 CAPNS2Q96L46 248 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.035e-41■□□□□ 9.6
VEGFA-225ENST00000523950 TMEM39BQ9GZU3 492 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 NDUFB9Q9Y6M9 179 aa15.24■□□□□ 0.03
VEGFA-225ENST00000523950 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 SALL3Q9BXA9 1300 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 WDHD1O75717 1129 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 GLRX3O76003 335 aaKnown RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 MX1P20591 662 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 CYP7A1P22680 504 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 IREB2P48200 963 aaKnown RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 NFIAQ12857 509 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 DCAF15Q66K64 600 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 PAXIP1Q6ZW49 1069 aaPredicted RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 MAGEB6Q8N7X4 407 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
VEGFA-225ENST00000523950 ANGEL1Q9UNK9 670 aaKnown RBP15.23■□□□□ 0.03
VEGFA-225ENST00000523950 IGHDP01880 384 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 MAP2K2P36507 400 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 RGS3P49796 1198 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 NOGQ13253 232 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 LDLRAD1Q5T700 205 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 ZSCAN25Q6NSZ9 544 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 CYP4F22Q6NT55 531 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 AATFQ9NY61 560 aaKnown RBP eCLIP15.22■□□□□ 0.03
VEGFA-225ENST00000523950 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
VEGFA-225ENST00000523950 SLC10A3P09131 477 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 PDE6AP16499 860 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 ZNF157P51786 506 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-225ENST00000523950 TCP10Q12799 353 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 SLC9C2Q5TAH2 1124 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 ADGRA1Q86SQ6 560 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 TEX11Q8IYF3 940 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 STAP2Q9UGK3 403 aa15.21■□□□□ 0.03
VEGFA-225ENST00000523950 ATRNL1Q5VV63 1379 aa15.21■□□□□ 0.02
VEGFA-225ENST00000523950 UBE2Q2LH0YL09 131 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 USP2O75604 605 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-225ENST00000523950 ADD2P35612 726 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 NUCB1Q02818 461 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
VEGFA-225ENST00000523950 MOB2Q70IA6 237 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 CHD1LQ86WJ1 897 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms