RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TFRCP02786 760 aaKnown RBP14.73□□□□□ -0.05
SDCBP-211ENST00000523441 GJB1P08034 283 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 CYP2C8P10632 490 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 ELNP15502 786 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 TCP10Q12799 353 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 SLC4A10Q6U841 1118 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
SDCBP-211ENST00000523441 C9orf78Q9NZ63 289 aaPredicted RBP14.73□□□□□ -0.05
SDCBP-211ENST00000523441 CACNA1FO60840 1977 aa14.73□□□□□ -0.05
SDCBP-211ENST00000523441 ALPK3Q96L96 1907 aa14.72□□□□□ -0.05
SDCBP-211ENST00000523441 UBE4AQ14139 1066 aa14.72□□□□□ -0.05
SDCBP-211ENST00000523441 DCAF15Q66K64 600 aa14.72□□□□□ -0.05
SDCBP-211ENST00000523441 GRM8O00222 908 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 FCGRTP55899 365 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 PPATQ06203 517 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 BEND3Q5T5X7 828 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 ANKRD23Q86SG2 305 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 DEFB118Q96PH6 123 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 ZCCHC17Q9NP64 241 aaKnown RBP14.71□□□□□ -0.05
SDCBP-211ENST00000523441 COL6A3P12111 3177 aa14.71□□□□□ -0.05
SDCBP-211ENST00000523441 ADCY3O60266 1144 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 CAVIN4Q5BKX8 364 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 METTL24Q5JXM2 366 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 GADL1Q6ZQY3 521 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 Q7L0L9 218 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 HOOK2Q96ED9 719 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 PRO3102Q9H379 93 aa14.7□□□□□ -0.06
SDCBP-211ENST00000523441 SGPL1O95470 568 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 INHAP05111 366 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 BCAMP50895 628 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 LRRC24Q50LG9 513 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 APOBEC3HQ6NTF7 200 aaKnown RBP14.69□□□□□ -0.06
SDCBP-211ENST00000523441 WWC1Q8IX03 1113 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 C7orf61Q8IZ16 206 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 SLAIN1Q8ND83 568 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 SUCLG2Q96I99 432 aa14.69□□□□□ -0.06
SDCBP-211ENST00000523441 PARK7Q99497 189 aaKnown RBP14.69□□□□□ -0.06
SDCBP-211ENST00000523441 PRKRIP1Q9H875 184 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-211ENST00000523441 ZMYND8Q9ULU4 1186 aaPredicted RBP14.69□□□□□ -0.06
SDCBP-211ENST00000523441 ADGRA2Q96PE1 1338 aa14.68□□□□□ -0.06
SDCBP-211ENST00000523441 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
SDCBP-211ENST00000523441 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-211ENST00000523441 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
SDCBP-211ENST00000523441 FAM83AQ86UY5 434 aa14.68□□□□□ -0.06
SDCBP-211ENST00000523441 TBC1D22AQ8WUA7 517 aa14.68□□□□□ -0.06
SDCBP-211ENST00000523441 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
SDCBP-211ENST00000523441 ZDHHC15Q96MV8 337 aa14.68□□□□□ -0.06
SDCBP-211ENST00000523441 SYN1P17600 705 aa14.67□□□□□ -0.06
SDCBP-211ENST00000523441 FLT3LGP49771 235 aa14.67□□□□□ -0.06
SDCBP-211ENST00000523441 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
SDCBP-211ENST00000523441 DEFB123Q8N688 67 aa14.67□□□□□ -0.06
SDCBP-211ENST00000523441 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
SDCBP-211ENST00000523441 DIS3LQ8TF46 1054 aaKnown RBP14.67□□□□□ -0.06
SDCBP-211ENST00000523441 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
SDCBP-211ENST00000523441 VAMP4O75379 141 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 HDLBPQ00341 1268 aaKnown RBP14.66□□□□□ -0.06
SDCBP-211ENST00000523441 NFIAQ12857 509 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 MOGSQ13724 837 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 DIXDC1Q155Q3 683 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 GPAT2Q6NUI2 795 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 KCNH4Q9UQ05 1017 aa14.66□□□□□ -0.06
SDCBP-211ENST00000523441 A0A0C4DFX4 3053 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 BCRP11274 1271 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 KCNA4P22459 653 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 CCDC184Q52MB2 194 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 ZFPM1Q8IX07 1006 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
SDCBP-211ENST00000523441 FAM151AQ8WW52 585 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 BICC1Q9H694 974 aaKnown RBP14.65□□□□□ -0.06
SDCBP-211ENST00000523441 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 MAST3O60307 1309 aa14.65□□□□□ -0.06
SDCBP-211ENST00000523441 NBPF7P0C2Y1 421 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-211ENST00000523441 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
SDCBP-211ENST00000523441 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
SDCBP-211ENST00000523441 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-211ENST00000523441 SRCIN1Q9C0H9 1055 aa14.64□□□□□ -0.07
SDCBP-211ENST00000523441 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-211ENST00000523441 RPAP1Q9BWH6 1393 aaPredicted RBP14.63□□□□□ -0.07
SDCBP-211ENST00000523441 FKBP1CQ5VVH2 108 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 NECAB2Q7Z6G3 386 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 ZSCAN29Q8IWY8 852 aaPredicted RBP14.63□□□□□ -0.07
SDCBP-211ENST00000523441 KAZALD1Q96I82 304 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 PICK1Q9NRD5 415 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 USP40Q9NVE5 1235 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 DAGLAQ9Y4D2 1042 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
SDCBP-211ENST00000523441 LAMA3Q16787 3333 aa14.63□□□□□ -0.07
SDCBP-211ENST00000523441 PTPRFP10586 1907 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 A0A1W2PPC1 479 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 HHIPL2Q6UWX4 724 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 ANKRD13CQ8N6S4 541 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 ZNF112Q9UJU3 913 aa14.62□□□□□ -0.07
SDCBP-211ENST00000523441 MYH2Q9UKX2 1941 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms