RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CCL15-CCL14A0A0B4J2E2 113 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 CETPP11597 493 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 PPATQ06203 517 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 CCL15Q16663 113 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 ZGPATQ8N5A5 531 aaKnown RBP15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 ZNF341Q9BYN7 854 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 ZFYVE28Q9HCC9 887 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 AKAP2Q9Y2D5 859 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 TRIM17Q9Y577 477 aa15.71■□□□□ 0.11
TOP1MT-217ENST00000523417 ARAP2Q8WZ64 1704 aa15.71■□□□□ 0.1
TOP1MT-217ENST00000523417 PRDX5P30044 214 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 PHKA1P46020 1223 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 TIMM10P62072 90 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 MAP3K10Q02779 954 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 PPIL2Q13356 520 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 ARHGEF6Q15052 776 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 ZKSCAN4Q969J2 545 aaPredicted RBP15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 WRNIP1Q96S55 665 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 IDI2Q9BXS1 227 aa15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
TOP1MT-217ENST00000523417 SRGAP3O43295 1099 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 SNAPC2Q13487 334 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 DIXDC1Q155Q3 683 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 FAM43AQ8N2R8 423 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 OTUD5Q96G74 571 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 USP40Q9NVE5 1235 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 FAM198AQ9UFP1 575 aa15.69■□□□□ 0.1
TOP1MT-217ENST00000523417 GAKO14976 1311 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 IRF6O14896 467 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 TLR2O60603 784 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 ENTPD3O75355 529 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 WDHD1O75717 1129 aaPredicted RBP15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 TRIM27P14373 513 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 TAF1CQ15572 869 aaPredicted RBP15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 NOL9Q5SY16 702 aaKnown RBP15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 SPTY2D1Q68D10 685 aaPredicted RBP15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 SLF2Q8IX21 1173 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 CD99L2Q8TCZ2 262 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 ARMC5Q96C12 935 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 KCNH4Q9UQ05 1017 aa15.68■□□□□ 0.1
TOP1MT-217ENST00000523417 BTBD19C9JJ37 291 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 MAP4K4O95819 1239 aaPredicted RBP15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 GNAI2P04899 355 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 ADORA1P30542 326 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 NFIAQ12857 509 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 MIGA2Q7L4E1 593 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
TOP1MT-217ENST00000523417 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 BCAR3O75815 825 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 GNRH1P01148 92 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 INPP5BP32019 993 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 CAP1Q01518 475 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 TFCP2Q12800 502 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 RASGRF1Q13972 1273 aa15.66■□□□□ 0.1
TOP1MT-217ENST00000523417 PHF20L1A8MW92 1017 aa15.65■□□□□ 0.1
TOP1MT-217ENST00000523417 CXCL11O14625 94 aa15.65■□□□□ 0.1
TOP1MT-217ENST00000523417 SLC34A2O95436 690 aa15.65■□□□□ 0.1
TOP1MT-217ENST00000523417 ANKRD23Q86SG2 305 aa15.65■□□□□ 0.1
TOP1MT-217ENST00000523417 ZFPM1Q8IX07 1006 aa15.65■□□□□ 0.1
TOP1MT-217ENST00000523417 GPR75-ASB3A0A0A6YYF3 556 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 IGSF3O75054 1194 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 TCP10Q12799 353 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 MOGSQ13724 837 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 C17orf99Q6UX52 265 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 GPR108Q9NPR9 543 aa15.64■□□□□ 0.09
TOP1MT-217ENST00000523417 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 ARID4AP29374 1257 aaPredicted RBP15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 RGS3P49796 1198 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 PRMT2P55345 433 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 POLA2Q14181 598 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 PRPF38BQ5VTL8 546 aaKnown RBP15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 ZKSCAN2Q63HK3 967 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 HMG20BQ9P0W2 317 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 PDE4DIPQ5VU43 2346 aa15.63■□□□□ 0.09
TOP1MT-217ENST00000523417 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 OTOFQ9HC10 1997 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 PNMA6EA0A0J9YXQ4 647 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 TBC1D12O60347 775 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 LDHCP07864 332 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 LACTBP83111 547 aaPredicted RBP15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 ATP8B2P98198 1209 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 FRAT1Q92837 279 aaPredicted RBP15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 ABCF2Q9UG63 623 aa15.62■□□□□ 0.09
TOP1MT-217ENST00000523417 CTNND1O60716 968 aaKnown RBP15.61■□□□□ 0.09
TOP1MT-217ENST00000523417 RHBDL3P58872 404 aa15.61■□□□□ 0.09
TOP1MT-217ENST00000523417 MECOMQ03112 1051 aa15.61■□□□□ 0.09
TOP1MT-217ENST00000523417 KIF22Q14807 665 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 675.1 ms