RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 POLR2DO15514 142 aaKnown RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 RNMTO43148 476 aaKnown RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 ZBTB43O43298 467 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CHGBP05060 677 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 TUBBP07437 444 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 GCKRQ14397 625 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 MUM1L1Q5H9M0 696 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 TMEM67Q5HYA8 995 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CCDC181Q5TID7 509 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 KRT40Q6A162 431 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 TOGARAM2Q6ZUX3 1019 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 BPIFA3Q9BQP9 254 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CDC23Q9UJX2 597 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 MROH1Q8NDA8 1641 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 IFIT3O14879 490 aaKnown RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CCT6AP40227 531 aaKnown RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 KANK3Q6NY19 840 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 SRLQ86TD4 932 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 PHKBQ93100 1093 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 JRKLQ9Y4A0 524 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CUTAO60888 179 aa10.27□□□□□ -0.76
CSMD1-212ENST00000523387 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.76
CSMD1-212ENST00000523387 MLKLQ8NB16 471 aa10.27□□□□□ -0.76
CSMD1-212ENST00000523387 HAUS7Q99871 368 aa10.27□□□□□ -0.76
CSMD1-212ENST00000523387 BRMS1Q9HCU9 246 aa10.27□□□□□ -0.76
CSMD1-212ENST00000523387 PRAMEF22A3QJZ6 481 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 POSTNQ15063 836 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 ICE2Q659A1 982 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 CNGA4Q8IV77 575 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 CTAGE1Q96RT6 745 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 FAM204AQ9H8W3 233 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 USP6P35125 1406 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 MYO1BO43795 1136 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 SLC39A14Q15043 492 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 JADE2Q9NQC1 790 aa10.27□□□□□ -0.77
CSMD1-212ENST00000523387 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 MATR3P43243 847 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 STOX1Q6ZVD7 989 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 FAM76AQ8TAV0 307 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 FAM71BQ8TC56 605 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 MRFAP1Q9Y605 127 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 FRMPD1Q5SYB0 1578 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 SOWAHDA6NJG2 315 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 TUBB2AQ13885 445 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 CTCFLQ8NI51 663 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 TUBB2BQ9BVA1 445 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 IRX2Q9BZI1 471 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 TTF2Q9UNY4 1162 aaKnown RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 ZRANB2O95218 330 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 CDR1P51861 262 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 KIF23Q02241 960 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 RNF187Q5TA31 235 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-212ENST00000523387 SLC35F6Q8N357 371 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 GIMAP7Q8NHV1 300 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 C19orf44Q9H6X5 657 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
CSMD1-212ENST00000523387 SLC20A2Q08357 652 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 E2F4Q16254 413 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 SLF1Q9BQI6 1058 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 ADGRL3Q9HAR2 1447 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 EIF3CLB5ME19 914 aaKnown RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 SASH3O75995 380 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 ZFYP08048 801 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 IL15P40933 162 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 MAGEA9P43362 315 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 MAP3K9P80192 1104 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CASP8Q14790 479 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CCDC93Q567U6 631 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CCDC91Q7Z6B0 441 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 REXO1L1PQ8IX06 675 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 KCNH5Q8NCM2 988 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 EIF3CQ99613 913 aaKnown RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 KIF20BQ96Q89 1820 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CTDNEP1O95476 244 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 LIG3P49916 1009 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 CKAP4Q07065 602 aaKnown RBP10.25□□□□□ -0.77
CSMD1-212ENST00000523387 STIM1Q13586 685 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 RRAGBQ5VZM2 374 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 MYL10Q9BUA6 226 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
CSMD1-212ENST00000523387 SIRT1Q96EB6 747 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms