RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PPATQ06203 517 aa28.55■■■□□ 2.16
PVT1-218ENST00000523328 PUM3Q15397 648 aaKnown RBP28.55■■■□□ 2.16
PVT1-218ENST00000523328 C17orf99Q6UX52 265 aa28.55■■■□□ 2.16
PVT1-218ENST00000523328 MIGA2Q7L4E1 593 aa28.55■■■□□ 2.16
PVT1-218ENST00000523328 MRPL50Q8N5N7 158 aaKnown RBP28.55■■■□□ 2.16
PVT1-218ENST00000523328 ZNF341Q9BYN7 854 aa28.55■■■□□ 2.16
PVT1-218ENST00000523328 AK9Q5TCS8 1911 aa28.55■■■□□ 2.16
PVT1-218ENST00000523328 IFIT1P09914 478 aaKnown RBP28.54■■■□□ 2.16
PVT1-218ENST00000523328 INPP5BP32019 993 aa28.54■■■□□ 2.16
PVT1-218ENST00000523328 CTGFP29279 349 aa28.53■■■□□ 2.16
PVT1-218ENST00000523328 PRMT2P55345 433 aa28.53■■■□□ 2.16
PVT1-218ENST00000523328 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.53■■■□□ 2.16
PVT1-218ENST00000523328 USP44Q9H0E7 712 aa28.53■■■□□ 2.16
PVT1-218ENST00000523328 COLQQ9Y215 455 aaPredicted RBP28.53■■■□□ 2.16
PVT1-218ENST00000523328 ZNF521Q96K83 1311 aa28.52■■■□□ 2.16
PVT1-218ENST00000523328 FAM151AQ8WW52 585 aa28.52■■■□□ 2.16
PVT1-218ENST00000523328 PTPRCP08575 1304 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 ADGRA2Q96PE1 1338 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 ANKRD23Q86SG2 305 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 CPA4Q9UI42 421 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 ZNF112Q9UJU3 913 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 KCNH4Q9UQ05 1017 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 TRIOBPQ9H2D6 2365 aa28.51■■■□□ 2.15
PVT1-218ENST00000523328 RFX5P48382 616 aaPredicted RBP28.5■■■□□ 2.15
PVT1-218ENST00000523328 FAM9BQ8IZU0 186 aa28.5■■■□□ 2.15
PVT1-218ENST00000523328 WDR66Q8TBY9 1149 aa28.5■■■□□ 2.15
PVT1-218ENST00000523328 DAGLAQ9Y4D2 1042 aa28.5■■■□□ 2.15
PVT1-218ENST00000523328 ECM2O94769 699 aaPredicted RBP28.49■■■□□ 2.15
PVT1-218ENST00000523328 TRIM47Q96LD4 638 aa28.49■■■□□ 2.15
PVT1-218ENST00000523328 SRRDQ9UH36 339 aa28.49■■■□□ 2.15
PVT1-218ENST00000523328 EYA2O00167 538 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 PDHXO00330 501 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 SLC5A1P13866 664 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 PSMC4P43686 418 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 MOGSQ13724 837 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 MTFR1Q15390 333 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 CDC42EP5Q6NZY7 148 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 LPIN2Q92539 896 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 SHISA4Q96DD7 197 aa28.48■■■□□ 2.15
PVT1-218ENST00000523328 H0YGN5 161 aa28.47■■■□□ 2.15
PVT1-218ENST00000523328 TCP10Q12799 353 aa28.47■■■□□ 2.15
PVT1-218ENST00000523328 NFIAQ12857 509 aa28.47■■■□□ 2.15
PVT1-218ENST00000523328 DIXDC1Q155Q3 683 aa28.47■■■□□ 2.15
PVT1-218ENST00000523328 OSBPP22059 807 aa28.46■■■□□ 2.15
PVT1-218ENST00000523328 NOL9Q5SY16 702 aaKnown RBP28.46■■■□□ 2.15
PVT1-218ENST00000523328 ATG9AQ7Z3C6 839 aa28.46■■■□□ 2.15
PVT1-218ENST00000523328 MGAMO43451 1857 aa28.46■■■□□ 2.15
PVT1-218ENST00000523328 PRDX5P30044 214 aa28.45■■■□□ 2.14
PVT1-218ENST00000523328 FAM198AQ9UFP1 575 aa28.45■■■□□ 2.14
PVT1-218ENST00000523328 SSH1Q8WYL5 1049 aa28.44■■■□□ 2.14
PVT1-218ENST00000523328 HOXD10P28358 340 aa28.43■■■□□ 2.14
PVT1-218ENST00000523328 GRK4P32298 578 aa28.43■■■□□ 2.14
PVT1-218ENST00000523328 DOCK2Q92608 1830 aa28.43■■■□□ 2.14
PVT1-218ENST00000523328 FMNL1O95466 1100 aaPredicted RBP28.42■■■□□ 2.14
PVT1-218ENST00000523328 ZEB1P37275 1124 aaPredicted RBP28.42■■■□□ 2.14
PVT1-218ENST00000523328 MYH2Q9UKX2 1941 aa28.41■■■□□ 2.14
PVT1-218ENST00000523328 GPAT2Q6NUI2 795 aa28.41■■■□□ 2.14
PVT1-218ENST00000523328 ZFPM1Q8IX07 1006 aa28.41■■■□□ 2.14
PVT1-218ENST00000523328 RAET1EQ8TD07 263 aa28.41■■■□□ 2.14
PVT1-218ENST00000523328 MYPNQ86TC9 1320 aa28.41■■■□□ 2.14
PVT1-218ENST00000523328 ATRNL1Q5VV63 1379 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 BCRP11274 1271 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 UBE2Q1Q7Z7E8 422 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 USP40Q9NVE5 1235 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 SZT2Q5T011 3432 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 SALL1Q9NSC2 1324 aa28.4■■■□□ 2.14
PVT1-218ENST00000523328 PTPRFP10586 1907 aa28.39■■■□□ 2.14
PVT1-218ENST00000523328 CXCL11O14625 94 aa28.39■■■□□ 2.14
PVT1-218ENST00000523328 LDHBP07195 334 aaKnown RBP28.39■■■□□ 2.14
PVT1-218ENST00000523328 NKX2-3Q8TAU0 364 aa28.39■■■□□ 2.14
PVT1-218ENST00000523328 PARK7Q99497 189 aaKnown RBP28.39■■■□□ 2.14
PVT1-218ENST00000523328 CYP2C8P10632 490 aa28.38■■■□□ 2.13
PVT1-218ENST00000523328 GJA8P48165 433 aa28.38■■■□□ 2.13
PVT1-218ENST00000523328 ATP2B3Q16720 1220 aa28.38■■■□□ 2.13
PVT1-218ENST00000523328 FBXO3Q9UK99 471 aa28.38■■■□□ 2.13
PVT1-218ENST00000523328 RANBP2P49792 3224 aaKnown RBP28.37■■■□□ 2.13
PVT1-218ENST00000523328 PHF20L1A8MW92 1017 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 CIAO1O76071 339 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 GJB1P08034 283 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 CCL5P13501 91 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 PRKCZQ05513 592 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 CHRDL2Q6WN34 429 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 SIL1Q9H173 461 aa28.37■■■□□ 2.13
PVT1-218ENST00000523328 DPF3Q92784 378 aa28.36■■■□□ 2.13
PVT1-218ENST00000523328 GNL3LQ9NVN8 582 aaKnown RBP28.36■■■□□ 2.13
PVT1-218ENST00000523328 PHIPQ8WWQ0 1821 aa28.36■■■□□ 2.13
PVT1-218ENST00000523328 RFX7Q2KHR2 1363 aa28.36■■■□□ 2.13
PVT1-218ENST00000523328 PHKA1P46020 1223 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 FCGRTP55899 365 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 SCYL3Q8IZE3 742 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 IDI2Q9BXS1 227 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 RNF208Q9H0X6 261 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 CEP126Q9P2H0 1117 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 DENND2AQ9ULE3 1009 aa28.35■■■□□ 2.13
PVT1-218ENST00000523328 A0A0G2JLL6 359 aaPredicted RBP28.34■■■□□ 2.13
PVT1-218ENST00000523328 E9PSI1 815 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 SEMA3EO15041 775 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 ZBTB22O15209 634 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 RGS3P49796 1198 aa28.34■■■□□ 2.13
PVT1-218ENST00000523328 PRRT2Q7Z6L0 340 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms