RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 MCOLN1Q9GZU1 580 aa20.02■□□□□ 0.8
CLN8-206ENST00000523237 ABCF2Q9UG63 623 aa20.02■□□□□ 0.8
CLN8-206ENST00000523237 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
CLN8-206ENST00000523237 MS4A1P11836 297 aa20.01■□□□□ 0.79
CLN8-206ENST00000523237 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
CLN8-206ENST00000523237 CDC42EP5Q6NZY7 148 aa20.01■□□□□ 0.79
CLN8-206ENST00000523237 DZIP1Q86YF9 867 aaKnown RBP20.01■□□□□ 0.79
CLN8-206ENST00000523237 SLF2Q8IX21 1173 aa20.01■□□□□ 0.79
CLN8-206ENST00000523237 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
CLN8-206ENST00000523237 SURF6O75683 361 aaKnown RBP20■□□□□ 0.79
CLN8-206ENST00000523237 MAP3K9P80192 1104 aa20■□□□□ 0.79
CLN8-206ENST00000523237 PPP1R3FQ6ZSY5 799 aaPredicted RBP20■□□□□ 0.79
CLN8-206ENST00000523237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20■□□□□ 0.79
CLN8-206ENST00000523237 FAM151AQ8WW52 585 aa20■□□□□ 0.79
CLN8-206ENST00000523237 GPR108Q9NPR9 543 aa20■□□□□ 0.79
CLN8-206ENST00000523237 CSADQ9Y600 493 aa20■□□□□ 0.79
CLN8-206ENST00000523237 VGLL4Q14135 290 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 DCAF15Q66K64 600 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 IFNL1Q8IU54 200 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 PANK1Q8TE04 598 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 OPTNQ96CV9 577 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 CFHR5Q9BXR6 569 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 USP40Q9NVE5 1235 aa19.99■□□□□ 0.79
CLN8-206ENST00000523237 ARID4AP29374 1257 aaPredicted RBP19.98■□□□□ 0.79
CLN8-206ENST00000523237 GJA5P36382 358 aa19.98■□□□□ 0.79
CLN8-206ENST00000523237 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
CLN8-206ENST00000523237 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
CLN8-206ENST00000523237 SPATA5Q8NB90 893 aa19.98■□□□□ 0.79
CLN8-206ENST00000523237 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
CLN8-206ENST00000523237 GAKO14976 1311 aa19.98■□□□□ 0.79
CLN8-206ENST00000523237 UQCRFS1P1P0C7P4 283 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 TCP10Q12799 353 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 TNNI3KQ59H18 835 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 OTUD7BQ6GQQ9 843 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 FAM163AQ96GL9 167 aaPredicted RBP19.97■□□□□ 0.79
CLN8-206ENST00000523237 WRNIP1Q96S55 665 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 NOP58Q9Y2X3 529 aaKnown RBP19.97■□□□□ 0.79
CLN8-206ENST00000523237 FPGT-TNNI3KV9GXZ4 949 aa19.97■□□□□ 0.79
CLN8-206ENST00000523237 CCDC85CA6NKD9 419 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 GPR25O00155 361 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 NFIAQ12857 509 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 PI16Q6UXB8 463 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 CTU1Q7Z7A3 348 aaKnown RBP19.96■□□□□ 0.79
CLN8-206ENST00000523237 ZNF296Q8WUU4 475 aaPredicted RBP19.96■□□□□ 0.79
CLN8-206ENST00000523237 ZNF341Q9BYN7 854 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 DOCK2Q92608 1830 aa19.96■□□□□ 0.79
CLN8-206ENST00000523237 IGF2BP3O00425 579 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLN8-206ENST00000523237 MCAMP43121 646 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 MECOMQ03112 1051 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 CCDC158Q5M9N0 1113 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 FAM198AQ9UFP1 575 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 MROH7-TTC4A0A0A0MT08 1334 aa19.95■□□□□ 0.78
CLN8-206ENST00000523237 TESPA1A2RU30 521 aaPredicted RBP19.94■□□□□ 0.78
CLN8-206ENST00000523237 BTDP43251 543 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 GSTO1P78417 241 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 TTC39AQ5SRH9 613 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 MIGA2Q7L4E1 593 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 CNKSR2Q8WXI2 1034 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 OTUD5Q96G74 571 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 IDI2Q9BXS1 227 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 SNCAIPQ9Y6H5 919 aa19.94■□□□□ 0.78
CLN8-206ENST00000523237 SPDYE5A6NIY4 337 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 FKTNO75072 461 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 ENTPD3O75355 529 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 LDHCP07864 332 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 RGS3P49796 1198 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 GTF2A2P52657 109 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 TBC1D9Q6ZT07 1266 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 ERO1BQ86YB8 467 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 ZKSCAN4Q969J2 545 aaPredicted RBP19.93■□□□□ 0.78
CLN8-206ENST00000523237 MS4A4AQ96JQ5 239 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 DBNDD2Q9BQY9 259 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 R3HDMLQ9H3Y0 253 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 RAI14Q9P0K7 980 aa19.93■□□□□ 0.78
CLN8-206ENST00000523237 GPR75-ASB3A0A0A6YYF3 556 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 PTPN18Q99952 460 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 LRP2BPQ9P2M1 347 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 MAST2Q6P0Q8 1798 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 RFX7Q2KHR2 1363 aa19.92■□□□□ 0.78
CLN8-206ENST00000523237 PKN2Q16513 984 aaKnown RBP19.91■□□□□ 0.78
CLN8-206ENST00000523237 ERC1Q8IUD2 1116 aa19.91■□□□□ 0.78
CLN8-206ENST00000523237 ZFPM1Q8IX07 1006 aa19.91■□□□□ 0.78
CLN8-206ENST00000523237 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
CLN8-206ENST00000523237 NSUN4Q96CB9 384 aaKnown RBP19.91■□□□□ 0.78
CLN8-206ENST00000523237 COG6Q9Y2V7 657 aa19.91■□□□□ 0.78
CLN8-206ENST00000523237 CCL15-CCL14A0A0B4J2E2 113 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
CLN8-206ENST00000523237 INPP5BP32019 993 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 CCL15Q16663 113 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 ZSCAN29Q8IWY8 852 aaPredicted RBP19.9■□□□□ 0.78
CLN8-206ENST00000523237 ZNF512BQ96KM6 892 aaPredicted RBP19.9■□□□□ 0.78
CLN8-206ENST00000523237 CHMP4BQ9H444 224 aaKnown RBP19.9■□□□□ 0.78
CLN8-206ENST00000523237 SNRKQ9NRH2 765 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 ZNF112Q9UJU3 913 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 EXOC6BQ9Y2D4 811 aa19.9■□□□□ 0.78
CLN8-206ENST00000523237 MAP4K4O95819 1239 aaPredicted RBP19.89■□□□□ 0.77
CLN8-206ENST00000523237 PPATQ06203 517 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms