RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ITPK1Q13572 414 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 HLFQ16534 295 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-211ENST00000523062 MEIOBQ8N635 442 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 EVI5LQ96CN4 794 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 CCDC8Q9H0W5 538 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-211ENST00000523062 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 FAM217BQ9NTX9 383 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-211ENST00000523062 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 KCNQ2O43526 872 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 MAP4K4O95819 1239 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-211ENST00000523062 GPTP24298 496 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 PTSQ03393 145 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 CCDC57Q2TAC2 916 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 PARP10Q53GL7 1025 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 RNFT1Q5M7Z0 435 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 ZNF34Q8IZ26 560 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 FAM89AQ96GI7 184 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 GJD4Q96KN9 370 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-211ENST00000523062 ANO2Q9NQ90 1003 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
CSMD1-211ENST00000523062 TRPC5Q9UL62 973 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-211ENST00000523062 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 RFX7Q2KHR2 1363 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 AK9Q5TCS8 1911 aa8.3□□□□□ -1.08
CSMD1-211ENST00000523062 RAD50Q92878 1312 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ZNF609O15014 1411 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 COL5A3P25940 1745 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 IRS4O14654 1257 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 SGSM2O43147 1006 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 CAMTA2O94983 1202 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 CSF1RP07333 972 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ATP5JP18859 108 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 GRM5P41594 1212 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 CTSWP56202 376 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ANAPC15P60006 121 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 IFIT5Q13325 482 aaKnown RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 TAF7LQ5H9L4 462 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 AK7Q96M32 723 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 TRMT112Q9UI30 125 aaKnown RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 DBNLQ9UJU6 430 aaKnown RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 ZNF652Q9Y2D9 606 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-211ENST00000523062 NUP98P52948 1817 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 UBN2Q6ZU65 1347 aa8.29□□□□□ -1.08
CSMD1-211ENST00000523062 K7ELQ4 463 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-211ENST00000523062 PDE8AO60658 829 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 DESI1Q6ICB0 168 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 IL17RAQ96F46 866 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 CEP126Q9P2H0 1117 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
CSMD1-211ENST00000523062 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
CSMD1-211ENST00000523062 BTAF1O14981 1849 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 ANKRD18BA2A2Z9 1011 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-211ENST00000523062 LRRC24Q50LG9 513 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 FOXJ1Q92949 421 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-211ENST00000523062 FSD1Q9BTV5 496 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 UTP14AQ9BVJ6 771 aaKnown RBP8.27□□□□□ -1.09
CSMD1-211ENST00000523062 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 SLKQ9H2G2 1235 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-211ENST00000523062 BOLA2Q9H3K6 86 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 GPCPD1Q9NPB8 672 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 LRP5O75197 1615 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 RIC1Q4ADV7 1423 aa8.27□□□□□ -1.09
CSMD1-211ENST00000523062 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
CSMD1-211ENST00000523062 ABCC12Q96J65 1359 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 HSP90AA1P07900 732 aaKnown RBP8.26□□□□□ -1.09
CSMD1-211ENST00000523062 ITGA6P23229 1130 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 SUSD4Q5VX71 490 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
CSMD1-211ENST00000523062 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.26□□□□□ -1.09
CSMD1-211ENST00000523062 HAUS7Q99871 368 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 PUS3Q9BZE2 481 aaKnown RBP8.26□□□□□ -1.09
CSMD1-211ENST00000523062 LSG1Q9H089 658 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms