RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 MYO1BO43795 1136 aa18.75■□□□□ 0.59
PCM1-218ENST00000523055 PUM3Q15397 648 aaKnown RBP18.75■□□□□ 0.59
PCM1-218ENST00000523055 CCL15Q16663 113 aa18.75■□□□□ 0.59
PCM1-218ENST00000523055 UBE2Q1Q7Z7E8 422 aa18.75■□□□□ 0.59
PCM1-218ENST00000523055 ITPRIPQ8IWB1 547 aa18.75■□□□□ 0.59
PCM1-218ENST00000523055 C1orf115Q9H7X2 142 aa18.75■□□□□ 0.59
PCM1-218ENST00000523055 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 GNAI2P04899 355 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 BCAMP50895 628 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 MTX1Q13505 466 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 VGLL4Q14135 290 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 MTFR1Q15390 333 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCM1-218ENST00000523055 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 COPRSQ9NQ92 184 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 TLR2O60603 784 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 CIAO1O76071 339 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 CTGFP29279 349 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 LACTBP83111 547 aaPredicted RBP18.74■□□□□ 0.59
PCM1-218ENST00000523055 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 SPDYE2Q495Y8 402 aa18.74■□□□□ 0.59
PCM1-218ENST00000523055 ZNF70Q9UC06 446 aaPredicted RBP18.74■□□□□ 0.59
PCM1-218ENST00000523055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.74■□□□□ 0.59
PCM1-218ENST00000523055 FAM205AQ6ZU69 1335 aa18.73■□□□□ 0.59
PCM1-218ENST00000523055 GTF2A2P52657 109 aa18.73■□□□□ 0.59
PCM1-218ENST00000523055 GRIK5Q16478 980 aa18.73■□□□□ 0.59
PCM1-218ENST00000523055 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
PCM1-218ENST00000523055 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
PCM1-218ENST00000523055 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
PCM1-218ENST00000523055 MFSD14BQ5SR56 506 aa18.72■□□□□ 0.59
PCM1-218ENST00000523055 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
PCM1-218ENST00000523055 TDRD3Q9H7E2 651 aaKnown RBP18.72■□□□□ 0.59
PCM1-218ENST00000523055 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
PCM1-218ENST00000523055 SLC5A1P13866 664 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
PCM1-218ENST00000523055 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 ATP2B3Q16720 1220 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 LPIN2Q92539 896 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 TMEM39BQ9GZU3 492 aa18.71■□□□□ 0.59
PCM1-218ENST00000523055 BTBD19C9JJ37 291 aa18.7■□□□□ 0.58
PCM1-218ENST00000523055 ZBTB7BO15156 539 aaPredicted RBP18.7■□□□□ 0.58
PCM1-218ENST00000523055 DPF3Q92784 378 aa18.7■□□□□ 0.58
PCM1-218ENST00000523055 CEP126Q9P2H0 1117 aa18.7■□□□□ 0.58
PCM1-218ENST00000523055 RCAN3Q9UKA8 241 aa18.7■□□□□ 0.58
PCM1-218ENST00000523055 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
PCM1-218ENST00000523055 ADORA1P30542 326 aa18.69■□□□□ 0.58
PCM1-218ENST00000523055 RBM5P52756 815 aaKnown RBP eCLIP18.69■□□□□ 0.58
PCM1-218ENST00000523055 TNFAIP1Q13829 316 aa18.69■□□□□ 0.58
PCM1-218ENST00000523055 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
PCM1-218ENST00000523055 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
PCM1-218ENST00000523055 GNRH1P01148 92 aa18.68■□□□□ 0.58
PCM1-218ENST00000523055 TFCP2Q12800 502 aa18.68■□□□□ 0.58
PCM1-218ENST00000523055 C17orf99Q6UX52 265 aa18.68■□□□□ 0.58
PCM1-218ENST00000523055 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
PCM1-218ENST00000523055 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
PCM1-218ENST00000523055 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
PCM1-218ENST00000523055 MYH2Q9UKX2 1941 aa18.67■□□□□ 0.58
PCM1-218ENST00000523055 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
PCM1-218ENST00000523055 SOX1O00570 391 aaPredicted RBP18.67■□□□□ 0.58
PCM1-218ENST00000523055 PHKA1P46020 1223 aa18.67■□□□□ 0.58
PCM1-218ENST00000523055 GJA8P48165 433 aa18.67■□□□□ 0.58
PCM1-218ENST00000523055 PRMT2P55345 433 aa18.67■□□□□ 0.58
PCM1-218ENST00000523055 IRF6O14896 467 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 TIMM10P62072 90 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 POLA2Q14181 598 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 TRIM47Q96LD4 638 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
PCM1-218ENST00000523055 ECM2O94769 699 aaPredicted RBP18.66■□□□□ 0.58
PCM1-218ENST00000523055 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
PCM1-218ENST00000523055 SRRDQ9UH36 339 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 COG6Q9Y2V7 657 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 CSADQ9Y600 493 aa18.66■□□□□ 0.58
PCM1-218ENST00000523055 ADGRA2Q96PE1 1338 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 A0A1B0GUL7 405 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 GJB1P08034 283 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 CETPP11597 493 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 OSBPP22059 807 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 KIF22Q14807 665 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 SSH3Q8TE77 659 aa18.65■□□□□ 0.58
PCM1-218ENST00000523055 C20orf194Q5TEA3 1177 aa18.64■□□□□ 0.57
PCM1-218ENST00000523055 ERO1BQ86YB8 467 aa18.64■□□□□ 0.57
PCM1-218ENST00000523055 ZKSCAN4Q969J2 545 aaPredicted RBP18.64■□□□□ 0.57
PCM1-218ENST00000523055 LRCH3Q96II8 777 aa18.64■□□□□ 0.57
PCM1-218ENST00000523055 UNC80Q8N2C7 3258 aa18.64■□□□□ 0.57
PCM1-218ENST00000523055 CCL5P13501 91 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 GRK4P32298 578 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 PSMC4P43686 418 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 CRKP46108 304 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
PCM1-218ENST00000523055 CCDC102BQ68D86 513 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 NKX2-3Q8TAU0 364 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 CPA4Q9UI42 421 aa18.63■□□□□ 0.57
PCM1-218ENST00000523055 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCM1-218ENST00000523055 SNAPC2Q13487 334 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms