RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 TAF1CQ15572 869 aaPredicted RBP11.77□□□□□ -0.53
SDC2-207ENST00000522911 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
SDC2-207ENST00000522911 FAM151AQ8WW52 585 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 SEMA3EO15041 775 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 SLC5A1P13866 664 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
SDC2-207ENST00000522911 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 FAM43AQ8N2R8 423 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
SDC2-207ENST00000522911 KCNH4Q9UQ05 1017 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
SDC2-207ENST00000522911 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
SDC2-207ENST00000522911 IRF6O14896 467 aa11.75□□□□□ -0.53
SDC2-207ENST00000522911 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
SDC2-207ENST00000522911 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
SDC2-207ENST00000522911 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
SDC2-207ENST00000522911 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
SDC2-207ENST00000522911 BTBD19C9JJ37 291 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 KCNA4P22459 653 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 LACTBP83111 547 aaPredicted RBP11.74□□□□□ -0.53
SDC2-207ENST00000522911 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 C17orf99Q6UX52 265 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 KLHDC4Q8TBB5 520 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
SDC2-207ENST00000522911 CACNB3P54284 484 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 SLC9C1Q4G0N8 1177 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 ZGPATQ8N5A5 531 aaKnown RBP11.73□□□□□ -0.53
SDC2-207ENST00000522911 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
SDC2-207ENST00000522911 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
SDC2-207ENST00000522911 ADGRA2Q96PE1 1338 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 IDI2Q9BXS1 227 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
SDC2-207ENST00000522911 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
SDC2-207ENST00000522911 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 GAKO14976 1311 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 CXCL11O14625 94 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
SDC2-207ENST00000522911 MOGSQ13724 837 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 KIF22Q14807 665 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 CDC42EP5Q6NZY7 148 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 COPRSQ9NQ92 184 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
SDC2-207ENST00000522911 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
SDC2-207ENST00000522911 ENTPD3O75355 529 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
SDC2-207ENST00000522911 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
SDC2-207ENST00000522911 CAPN2P17655 700 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.53
SDC2-207ENST00000522911 PRDX5P30044 214 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 INPP5BP32019 993 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 MTX1Q13505 466 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 ARHGAP45Q92619 1136 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
SDC2-207ENST00000522911 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 NFIAQ12857 509 aa11.7□□□□□ -0.54
SDC2-207ENST00000522911 HABP4Q5JVS0 413 aaKnown RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
SDC2-207ENST00000522911 SRRDQ9UH36 339 aa11.7□□□□□ -0.54
SDC2-207ENST00000522911 SLC45A1Q9Y2W3 748 aa11.7□□□□□ -0.54
SDC2-207ENST00000522911 MYH13Q9UKX3 1938 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 HOXD10P28358 340 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 DIXDC1Q155Q3 683 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
SDC2-207ENST00000522911 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
SDC2-207ENST00000522911 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
SDC2-207ENST00000522911 PDHXO00330 501 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 BCRP11274 1271 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 PHKA1P46020 1223 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
SDC2-207ENST00000522911 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
SDC2-207ENST00000522911 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
SDC2-207ENST00000522911 ARHGAP39Q9C0H5 1083 aa11.68□□□□□ -0.54
SDC2-207ENST00000522911 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
SDC2-207ENST00000522911 SZT2Q5T011 3432 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 TBC1D12O60347 775 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 CTNND1O60716 968 aaKnown RBP11.67□□□□□ -0.54
SDC2-207ENST00000522911 IGSF3O75054 1194 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
SDC2-207ENST00000522911 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
SDC2-207ENST00000522911 UBE2Q1Q7Z7E8 422 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms