RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MAP4K1Q92918 833 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 EYA2O00167 538 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 RXRAP19793 462 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 STX17P56962 302 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 ADCK5Q3MIX3 580 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
SYNPO-205ENST00000522122 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 GSTO1P78417 241 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 GOLGA1Q92805 767 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 PPP1R1BQ9UD71 204 aaPredicted RBP15.68■□□□□ 0.1
SYNPO-205ENST00000522122 ATP5JP18859 108 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 IRS4O14654 1257 aaPredicted RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 DESP17661 470 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 NBPF5PQ86XG9 351 aaPredicted RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 NR1I2O75469 434 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 ASIC1P78348 528 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 PRPF4BQ13523 1007 aaKnown RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 HEATR3Q7Z4Q2 680 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 KIAA1524Q8TCG1 905 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 MAGEB6P1A0A0J9YX57 407 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 EZRP15311 586 aaKnown RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 CALRP27797 417 aaKnown RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 STXBP4Q6ZWJ1 553 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 TUBB4BP68371 445 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 MAATS1Q7Z4T9 603 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 MAGEB6Q8N7X4 407 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 MRFAP1L1Q96HT8 127 aa15.67■□□□□ 0.1
SYNPO-205ENST00000522122 UTP14AQ9BVJ6 771 aaKnown RBP15.67■□□□□ 0.1
SYNPO-205ENST00000522122 KRT83P78385 493 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 IFI16Q16666 785 aaKnown RBP15.66■□□□□ 0.1
SYNPO-205ENST00000522122 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 KAT6BQ8WYB5 2073 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
SYNPO-205ENST00000522122 KRT86O43790 486 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 HLA-DOAP06340 250 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 MYZAPP0CAP1 466 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 IL2RBP14784 551 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 EHMT1Q9H9B1 1298 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 PODXL2Q9NZ53 605 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
SYNPO-205ENST00000522122 DIP2CQ9Y2E4 1556 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 TACC1O75410 805 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 KRT2P35908 639 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
SYNPO-205ENST00000522122 IQUBQ8NA54 791 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 DTNBO60941 627 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
SYNPO-205ENST00000522122 LARGE1O95461 756 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 NLRP12P59046 1061 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 KIF5AQ12840 1032 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
SYNPO-205ENST00000522122 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
SYNPO-205ENST00000522122 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 DSCC1Q9BVC3 393 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 PFKFB2O60825 505 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 DMTNQ08495 405 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 GCKRQ14397 625 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 ANO1Q5XXA6 986 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 NCOA5Q9HCD5 579 aaKnown RBP15.65■□□□□ 0.1
SYNPO-205ENST00000522122 CRB1P82279 1406 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 CTNNBL1Q8WYA6 563 aaPredicted RBP15.65■□□□□ 0.1
SYNPO-205ENST00000522122 EAF2Q96CJ1 260 aaPredicted RBP15.65■□□□□ 0.1
SYNPO-205ENST00000522122 TTC14Q96N46 770 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 ADCY9O60503 1353 aa15.65■□□□□ 0.1
SYNPO-205ENST00000522122 HSF2BPO75031 334 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 NAPAP54920 295 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 RILPL1Q5EBL4 403 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 MMRN2Q9H8L6 949 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 MACROD2A1Z1Q3 448 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 RPAP1Q9BWH6 1393 aaPredicted RBP15.64■□□□□ 0.09
SYNPO-205ENST00000522122 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 SMC1AQ14683 1233 aaKnown RBP15.64■□□□□ 0.09
SYNPO-205ENST00000522122 ERMNQ8TAM6 284 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 NGLY1Q96IV0 654 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 TMEM87BQ96K49 555 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 BAG1Q99933 345 aaPredicted RBP15.64■□□□□ 0.09
SYNPO-205ENST00000522122 TBCAO75347 108 aaKnown RBP15.64■□□□□ 0.09
SYNPO-205ENST00000522122 LRMPQ12912 555 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 ELF2Q15723 593 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 LRRC8AQ8IWT6 810 aa15.64■□□□□ 0.09
SYNPO-205ENST00000522122 ZNF569Q5MCW4 686 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 APPBP2Q92624 585 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 SYCP3Q8IZU3 236 aa15.63■□□□□ 0.09
SYNPO-205ENST00000522122 NEURL1BA8MQ27 555 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms