RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
SHPRH-209ENST00000521977 TSGA10IPQ3SY00 556 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 VPS53Q5VIR6 699 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 CREB3L3Q68CJ9 461 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 ZGPATQ8N5A5 531 aaKnown RBP11.41□□□□□ -0.58
SHPRH-209ENST00000521977 ZNF384Q8TF68 577 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
SHPRH-209ENST00000521977 ZC3H12CQ9C0D7 883 aaKnown RBP11.41□□□□□ -0.58
SHPRH-209ENST00000521977 ABCF2Q9UG63 623 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 CHD4Q14839 1912 aa11.41□□□□□ -0.58
SHPRH-209ENST00000521977 SLC27A2O14975 620 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 C21orf2O43822 256 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 PRDX5P30044 214 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 SPTY2D1Q68D10 685 aaPredicted RBP11.4□□□□□ -0.58
SHPRH-209ENST00000521977 SUPT20HQ8NEM7 779 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 STRBPQ96SI9 672 aaKnown RBP11.4□□□□□ -0.58
SHPRH-209ENST00000521977 PSMD1Q99460 953 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 RAI14Q9P0K7 980 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 PIM2Q9P1W9 311 aa11.4□□□□□ -0.58
SHPRH-209ENST00000521977 CCDC88AQ3V6T2 1871 aa11.4□□□□□ -0.59
SHPRH-209ENST00000521977 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 CYP7A1P22680 504 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 MECOMQ03112 1051 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 SOGA3Q5TF21 947 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 MICALL2Q8IY33 904 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 TBC1D2Q9BYX2 928 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
SHPRH-209ENST00000521977 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 ZNF646O15015 1829 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 MBD4O95243 580 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 LDHBP07195 334 aaKnown RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 CYP21A2P08686 494 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 ZKSCAN1P17029 563 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 BECN1Q14457 450 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 ALX1Q15699 326 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 RNF20Q5VTR2 975 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 RIOK1Q9BRS2 568 aaKnown RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 SUGT1Q9Y2Z0 365 aa11.38□□□□□ -0.59
SHPRH-209ENST00000521977 RPAP1Q9BWH6 1393 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-209ENST00000521977 PATL2C9JE40 543 aaKnown RBP11.37□□□□□ -0.59
SHPRH-209ENST00000521977 CD2BP2O95400 341 aaKnown RBP11.37□□□□□ -0.59
SHPRH-209ENST00000521977 FGAP02671 866 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 GNAT2P19087 354 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 FKBP1AP62942 108 aaKnown RBP11.37□□□□□ -0.59
SHPRH-209ENST00000521977 GRIK5Q16478 980 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 ADCK5Q3MIX3 580 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
SHPRH-209ENST00000521977 LCORLQ8N3X6 602 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
SHPRH-209ENST00000521977 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-209ENST00000521977 GTF2IP78347 998 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 KRT32Q14532 448 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 AOC3Q16853 763 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 DZIP1Q86YF9 867 aaKnown RBP11.36□□□□□ -0.59
SHPRH-209ENST00000521977 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 TTC14Q96N46 770 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 EPB41L4AQ9HCS5 686 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-209ENST00000521977 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 SCN9AQ15858 1988 aa11.36□□□□□ -0.59
SHPRH-209ENST00000521977 PSME4Q14997 1843 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 LAMA4Q16363 1823 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 ECE2O60344 883 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 NEK4P51957 841 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 PPP4CP60510 307 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 GSTO1P78417 241 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 STRIP1Q5VSL9 837 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 TTLL5Q6EMB2 1281 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
SHPRH-209ENST00000521977 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
SHPRH-209ENST00000521977 DBNDD1Q9H9R9 158 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 GAKO14976 1311 aa11.35□□□□□ -0.59
SHPRH-209ENST00000521977 K7ELQ4 463 aaPredicted RBP11.34□□□□□ -0.59
SHPRH-209ENST00000521977 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms