RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 MPHOSPH8Q99549 860 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 COPRSQ9NQ92 184 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 COL4A1P02462 1669 aa10.38□□□□□ -0.75
VPS13B-210ENST00000521932 SLX4Q8IY92 1834 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 TRIM32Q13049 653 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 RTKN2Q8IZC4 609 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 EXOC6Q8TAG9 804 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 SNED1Q8TER0 1413 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 WWC3Q9ULE0 1092 aa10.37□□□□□ -0.75
VPS13B-210ENST00000521932 TAF1P21675 1872 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 GRIN3BO60391 1043 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 CIAO1O76071 339 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
VPS13B-210ENST00000521932 GPR162Q16538 588 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 TAF7LQ5H9L4 462 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 OLFM4Q6UX06 510 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 ATG9AQ7Z3C6 839 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 KLHDC4Q8TBB5 520 aa10.36□□□□□ -0.75
VPS13B-210ENST00000521932 RTFDC1Q9BY42 306 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-210ENST00000521932 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
VPS13B-210ENST00000521932 TMX4Q9H1E5 349 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-210ENST00000521932 NOP58Q9Y2X3 529 aaKnown RBP10.36□□□□□ -0.75
VPS13B-210ENST00000521932 EYA2O00167 538 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-210ENST00000521932 CHRNDQ07001 517 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-210ENST00000521932 PSMD1Q99460 953 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 VPS33BQ9H267 617 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 NSFL1CQ9UNZ2 370 aaKnown RBP10.35□□□□□ -0.75
VPS13B-210ENST00000521932 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
VPS13B-210ENST00000521932 ARFGEF1Q9Y6D6 1849 aa10.35□□□□□ -0.75
VPS13B-210ENST00000521932 MROH5Q6ZUA9 1318 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 LTBP3Q9NS15 1303 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 LRRC37AA6NMS7 1700 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 SPTLC1O15269 473 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 HMMRO75330 724 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 IL15P40933 162 aaPredicted RBP10.34□□□□□ -0.75
VPS13B-210ENST00000521932 GPSM2P81274 684 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 SLC51AQ86UW1 340 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 MPNDQ8N594 471 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 VGLL2Q8N8G2 317 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 CNNM1Q9NRU3 951 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 TOR4AQ9NXH8 423 aa10.34□□□□□ -0.75
VPS13B-210ENST00000521932 XDHP47989 1333 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 NFKBIEO00221 500 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 ZBTB24O43167 697 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-210ENST00000521932 SURF6O75683 361 aaKnown RBP10.33□□□□□ -0.76
VPS13B-210ENST00000521932 PDE8BO95263 885 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 GJA5P36382 358 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 SKOR1P84550 965 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
VPS13B-210ENST00000521932 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-210ENST00000521932 MTMR2Q13614 643 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-210ENST00000521932 ARHGAP27Q6ZUM4 889 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 FAM117AQ9C073 453 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 SIL1Q9H173 461 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 ANKIB1Q9P2G1 1089 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 LIMD1Q9UGP4 676 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 POLLQ9UGP5 575 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
VPS13B-210ENST00000521932 FAM187AA6NFU0 413 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 TAF5LO75529 589 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 SASH1O94885 1247 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 G3BP1Q13283 466 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS13B-210ENST00000521932 UBE4AQ14139 1066 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 HSP90AB4PQ58FF6 505 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
VPS13B-210ENST00000521932 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 TBC1D16Q8TBP0 767 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 NUDT12Q9BQG2 462 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 CEP126Q9P2H0 1117 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 GGA1Q9UJY5 639 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 CACNA1SQ13698 1873 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 FER1L6Q2WGJ9 1857 aa10.32□□□□□ -0.76
VPS13B-210ENST00000521932 LTBP1Q14766 1721 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 WTIPA6NIX2 430 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-210ENST00000521932 CFAP99D6REC4 459 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 DGAT1O75907 488 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 FGFR2P21802 821 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 PRELPP51888 382 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 ERICH6BQ5W0A0 696 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 HELBQ8NG08 1087 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-210ENST00000521932 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
VPS13B-210ENST00000521932 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms