RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 DNAJC10Q8IXB1 793 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 SMARCC1Q92922 1105 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 HAUS7Q99871 368 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 HMG20BQ9P0W2 317 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 ASAP1Q9ULH1 1129 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 NUP98P52948 1817 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 BCORQ6W2J9 1755 aa8.05□□□□□ -1.12
CTNNA1-228ENST00000521640 CCDC171Q6TFL3 1326 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ARAP2Q8WZ64 1704 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 NEK4P51957 841 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ARID5BQ14865 1188 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ATG9AQ7Z3C6 839 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 MAP4K1Q92918 833 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 TNPO1Q92973 898 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 CDK15Q96Q40 435 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 ALDH8A1Q9H2A2 487 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 DBNLQ9UJU6 430 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 AKAP2Q9Y2D5 859 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 RTL9Q8NET4 1388 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 THSD7AQ9UPZ6 1657 aa8.04□□□□□ -1.12
CTNNA1-228ENST00000521640 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 SH3TC1Q8TE82 1336 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 SOCS7O14512 581 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 ZKSCAN1P17029 563 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 PIP4K2AP48426 406 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 EIF5P55010 431 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 TFCP2Q12800 502 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 KRT32Q14532 448 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 NECTIN1Q15223 517 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 VPS53Q5VIR6 699 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 CWC27Q6UX04 472 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 TMX3Q96JJ7 454 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 ZNF512BQ96KM6 892 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 ZSCAN31Q96LW9 406 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 TTC14Q96N46 770 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 IL25Q9H293 177 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 SH2B1Q9NRF2 756 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 DACH1Q9UI36 760 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 PALD1Q9ULE6 856 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 SNX14Q9Y5W7 946 aa8.03□□□□□ -1.12
CTNNA1-228ENST00000521640 ADH1CP00326 375 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 PSMA5P28066 241 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 GRM5P41594 1212 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 PTK2Q05397 1052 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 MCM6Q14566 821 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 ANKRD1Q15327 319 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 VPS72Q15906 364 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 CCDC57Q2TAC2 916 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 PARP10Q53GL7 1025 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 NLRP10Q86W26 655 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 KBTBD3Q8NAB2 608 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 ADAM32Q8TC27 787 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 SLC4A9Q96Q91 983 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 CCDC8Q9H0W5 538 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 SIL1Q9H173 461 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 WASF2Q9Y6W5 498 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 SCN7AQ01118 1682 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
CTNNA1-228ENST00000521640 PDE8AO60658 829 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 ZFYP08048 801 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 NR3C2P08235 984 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 CTSWP56202 376 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 NMIQ13287 307 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 IFIT5Q13325 482 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 NNTQ13423 1086 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 L1TD1Q5T7N2 865 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 ZNF34Q8IZ26 560 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 FNBP4Q8N3X1 1017 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 KLHDC4Q8TBB5 520 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 DBNDD2Q9BQY9 259 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 BOLA2Q9H3K6 86 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 HELLSQ9NRZ9 838 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 CEP126Q9P2H0 1117 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 LIMCH1Q9UPQ0 1083 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 ZBTB1Q9Y2K1 713 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 RIC1Q4ADV7 1423 aa8.01□□□□□ -1.13
CTNNA1-228ENST00000521640 BCL9LQ86UU0 1499 aa8□□□□□ -1.13
CTNNA1-228ENST00000521640 LOC102724428A0A0B4J2F2 783 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms