RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CDC42EP5Q6NZY7 148 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 HAUS7Q99871 368 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
CLK4-209ENST00000521621 F8W031 263 aaPredicted RBP11.55□□□□□ -0.56
CLK4-209ENST00000521621 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 ARMC9Q7Z3E5 817 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
CLK4-209ENST00000521621 CCDC8Q9H0W5 538 aaPredicted RBP11.55□□□□□ -0.56
CLK4-209ENST00000521621 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
CLK4-209ENST00000521621 AOX1Q06278 1338 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 WDR33Q9C0J8 1336 aaKnown RBP11.54□□□□□ -0.56
CLK4-209ENST00000521621 SLC10A3P09131 477 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 RBM5P52756 815 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLK4-209ENST00000521621 RASA3Q14644 834 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 RWDD1Q9H446 243 aaPredicted RBP11.54□□□□□ -0.56
CLK4-209ENST00000521621 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
CLK4-209ENST00000521621 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 PCDHAC2Q9Y5I4 1007 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 MYO5AQ9Y4I1 1855 aaKnown RBP11.54□□□□□ -0.56
CLK4-209ENST00000521621 TBC1D12O60347 775 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 RHBDL3P58872 404 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 STAP2Q9UGK3 403 aa11.54□□□□□ -0.56
CLK4-209ENST00000521621 ZAP70P43403 619 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 VEGFBP49765 207 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 NOGQ13253 232 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 BAG3O95817 575 aa11.53□□□□□ -0.56
CLK4-209ENST00000521621 METTL16Q86W50 562 aaKnown RBP11.53□□□□□ -0.56
CLK4-209ENST00000521621 ABT1Q9ULW3 272 aaKnown RBP11.53□□□□□ -0.56
CLK4-209ENST00000521621 CA12O43570 354 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 PPP1R12BO60237 982 aaPredicted RBP11.52□□□□□ -0.56
CLK4-209ENST00000521621 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.56
CLK4-209ENST00000521621 MAP3K12Q12852 859 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.56
CLK4-209ENST00000521621 CAPNS2Q96L46 248 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 IL1RAPL2Q9NP60 686 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.56
CLK4-209ENST00000521621 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.56
CLK4-209ENST00000521621 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
CLK4-209ENST00000521621 ZBTB48P10074 688 aaPredicted RBP11.52□□□□□ -0.57
CLK4-209ENST00000521621 BTDP43251 543 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
CLK4-209ENST00000521621 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
CLK4-209ENST00000521621 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 DCAF15Q66K64 600 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 USP40Q9NVE5 1235 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 LRP2BPQ9P2M1 347 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
CLK4-209ENST00000521621 SIPA1L1O43166 1804 aa11.52□□□□□ -0.57
CLK4-209ENST00000521621 USP2O75604 605 aaPredicted RBP11.51□□□□□ -0.57
CLK4-209ENST00000521621 HUNKP57058 714 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
CLK4-209ENST00000521621 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 GINM1Q9NU53 330 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 ABCF2Q9UG63 623 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
CLK4-209ENST00000521621 TCRBV5S4A2TA0A5A2 114 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
CLK4-209ENST00000521621 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLK4-209ENST00000521621 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
CLK4-209ENST00000521621 OSBPL3Q9H4L5 887 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
CLK4-209ENST00000521621 ERC2O15083 957 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 INHBEP58166 350 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 NBPF12Q5TAG4 269 aaPredicted RBP11.5□□□□□ -0.57
CLK4-209ENST00000521621 NOL10Q9BSC4 688 aaKnown RBP11.5□□□□□ -0.57
CLK4-209ENST00000521621 PAG1Q9NWQ8 432 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 NAV1Q8NEY1 1877 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 TM4SF4P48230 202 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 ZNF341Q9BYN7 854 aa11.5□□□□□ -0.57
CLK4-209ENST00000521621 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLK4-209ENST00000521621 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 EXOC6Q8TAG9 804 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 PI4K2BQ8TCG2 481 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 ZCCHC17Q9NP64 241 aaKnown RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 NUCB1Q02818 461 aa11.49□□□□□ -0.57
CLK4-209ENST00000521621 RIOK1Q9BRS2 568 aaKnown RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
CLK4-209ENST00000521621 ADD2P35612 726 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 HTRA3P83110 453 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 PHIPQ8WWQ0 1821 aa11.48□□□□□ -0.57
CLK4-209ENST00000521621 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms