RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 RAET1EQ8TD07 263 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 CSADQ9Y600 493 aa13.39□□□□□ -0.27
MRPS28-208ENST00000521605 SNAP23O00161 211 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 GNRH1P01148 92 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 GJB1P08034 283 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 CTGFP29279 349 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 PSMC4P43686 418 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 PRMT2P55345 433 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-208ENST00000521605 DCTPP1Q9H773 170 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 CPA4Q9UI42 421 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
MRPS28-208ENST00000521605 BTBD19C9JJ37 291 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 HMMRO75330 724 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-208ENST00000521605 OSBPP22059 807 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 MAP3K9P80192 1104 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
MRPS28-208ENST00000521605 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-208ENST00000521605 ANKRD2Q9GZV1 360 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
MRPS28-208ENST00000521605 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
MRPS28-208ENST00000521605 GNAI2P04899 355 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 CETPP11597 493 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 TNFAIP1Q13829 316 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
MRPS28-208ENST00000521605 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
MRPS28-208ENST00000521605 ZNF70Q9UC06 446 aaPredicted RBP13.36□□□□□ -0.27
MRPS28-208ENST00000521605 MYH3P11055 1940 aa13.36□□□□□ -0.27
MRPS28-208ENST00000521605 TAF5LO75529 589 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 HOXD10P28358 340 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 UBXN2AP68543 259 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 CHRNDQ07001 517 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 DNAAF4Q8WXU2 420 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 TEPSINQ96N21 525 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
MRPS28-208ENST00000521605 SPDYE5A6NIY4 337 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 IRF6O14896 467 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 EIF5BO60841 1220 aaKnown RBP13.34□□□□□ -0.27
MRPS28-208ENST00000521605 ITGA6P23229 1130 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 KSR2Q6VAB6 950 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-208ENST00000521605 MEIS3Q99687 375 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
MRPS28-208ENST00000521605 TFRCP02786 760 aaKnown RBP13.33□□□□□ -0.28
MRPS28-208ENST00000521605 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 PRKCZQ05513 592 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 SNAPC2Q13487 334 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
MRPS28-208ENST00000521605 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 ZNF804AQ7Z570 1209 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 ZKSCAN4Q969J2 545 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-208ENST00000521605 ZCCHC17Q9NP64 241 aaKnown RBP13.33□□□□□ -0.28
MRPS28-208ENST00000521605 SNCAIPQ9Y6H5 919 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 UTYO14607 1347 aa13.33□□□□□ -0.28
MRPS28-208ENST00000521605 F6X3S4 739 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 SGPL1O95470 568 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 ERO1BQ86YB8 467 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
MRPS28-208ENST00000521605 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
MRPS28-208ENST00000521605 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-208ENST00000521605 TTF2Q9UNY4 1162 aaKnown RBP13.32□□□□□ -0.28
MRPS28-208ENST00000521605 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 PDHXO00330 501 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 IL1R1P14778 569 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 TNNI2P48788 182 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 RGS3P49796 1198 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 BCAMP50895 628 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 MTX1Q13505 466 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 SLC4A10Q6U841 1118 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 MTMR10Q9NXD2 777 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 IRS2Q9Y4H2 1338 aa13.31□□□□□ -0.28
MRPS28-208ENST00000521605 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
MRPS28-208ENST00000521605 ELNP15502 786 aa13.3□□□□□ -0.28
MRPS28-208ENST00000521605 SYN1P17600 705 aa13.3□□□□□ -0.28
MRPS28-208ENST00000521605 ANP32AP39687 249 aaKnown RBP13.3□□□□□ -0.28
MRPS28-208ENST00000521605 CACNB3P54284 484 aa13.3□□□□□ -0.28
MRPS28-208ENST00000521605 FKBP1AP62942 108 aaKnown RBP13.3□□□□□ -0.28
MRPS28-208ENST00000521605 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
MRPS28-208ENST00000521605 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms