RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
MRPS28-207ENST00000521434 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
MRPS28-207ENST00000521434 ALPK3Q96L96 1907 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 PLIN1O60240 522 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-207ENST00000521434 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-207ENST00000521434 UBXN2AP68543 259 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 LINS1Q8NG48 757 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 ZKSCAN4Q969J2 545 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-207ENST00000521434 BIN2Q9UBW5 565 aaPredicted RBP11.31□□□□□ -0.6
MRPS28-207ENST00000521434 CPA4Q9UI42 421 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
MRPS28-207ENST00000521434 DOCK3Q8IZD9 2030 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
MRPS28-207ENST00000521434 GABBR2O75899 941 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
MRPS28-207ENST00000521434 FOXO4P98177 505 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 LDHAL6AQ6ZMR3 332 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 U2AF1L4Q8WU68 220 aaKnown RBP11.3□□□□□ -0.6
MRPS28-207ENST00000521434 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 HOOK2Q96ED9 719 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
MRPS28-207ENST00000521434 PDHXO00330 501 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 EVI5O60447 810 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 CACNB3P54284 484 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
MRPS28-207ENST00000521434 PPATQ06203 517 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 FLIIQ13045 1269 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 UBE4AQ14139 1066 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
MRPS28-207ENST00000521434 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
MRPS28-207ENST00000521434 SGPL1O95470 568 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 CAPN2P17655 700 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 GYG1P46976 350 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 PRKCZQ05513 592 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-207ENST00000521434 TWISTNBQ3B726 338 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-207ENST00000521434 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
MRPS28-207ENST00000521434 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-207ENST00000521434 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-207ENST00000521434 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
MRPS28-207ENST00000521434 FCGRTP55899 365 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 GRIK5Q16478 980 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 GPR153Q6NV75 609 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 ZDHHC15Q96MV8 337 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 PARK7Q99497 189 aaKnown RBP11.27□□□□□ -0.61
MRPS28-207ENST00000521434 ZNF341Q9BYN7 854 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 STAP2Q9UGK3 403 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 RPAP1Q9BWH6 1393 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-207ENST00000521434 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
MRPS28-207ENST00000521434 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
MRPS28-207ENST00000521434 INPP5BP32019 993 aa11.26□□□□□ -0.61
MRPS28-207ENST00000521434 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
MRPS28-207ENST00000521434 PTPRFP10586 1907 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 ADCY3O60266 1144 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
MRPS28-207ENST00000521434 BCRP11274 1271 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 BMP8BP34820 402 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 NUBP1P53384 320 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
MRPS28-207ENST00000521434 MOGSQ13724 837 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 EPHA10Q5JZY3 1008 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 DEFB123Q8N688 67 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
MRPS28-207ENST00000521434 FRAT2O75474 233 aaPredicted RBP11.24□□□□□ -0.61
MRPS28-207ENST00000521434 INHAP05111 366 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
MRPS28-207ENST00000521434 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 GDF15Q99988 308 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 ZNF112Q9UJU3 913 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
MRPS28-207ENST00000521434 STXBP5LQ9Y2K9 1186 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 MAST3O60307 1309 aa11.24□□□□□ -0.61
MRPS28-207ENST00000521434 GRM8O00222 908 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 CYP2C8P10632 490 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 ELNP15502 786 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 FLT3LGP49771 235 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 IRF5Q13568 498 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 CAVIN4Q5BKX8 364 aa11.23□□□□□ -0.61
MRPS28-207ENST00000521434 NOL9Q5SY16 702 aaKnown RBP11.23□□□□□ -0.61
MRPS28-207ENST00000521434 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms