RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SLC10A3P09131 477 aa25.3■■□□□ 1.64
TRIM35-203ENST00000521253 MAP2K1Q02750 393 aaPredicted RBP25.3■■□□□ 1.64
TRIM35-203ENST00000521253 CLASRPQ8N2M8 674 aaKnown RBP25.3■■□□□ 1.64
TRIM35-203ENST00000521253 ZNF384Q8TF68 577 aa25.3■■□□□ 1.64
TRIM35-203ENST00000521253 ZIC5Q96T25 663 aa25.3■■□□□ 1.64
TRIM35-203ENST00000521253 FAM83AQ86UY5 434 aa25.29■■□□□ 1.64
TRIM35-203ENST00000521253 SLF2Q8IX21 1173 aa25.29■■□□□ 1.64
TRIM35-203ENST00000521253 FAM163AQ96GL9 167 aaPredicted RBP25.29■■□□□ 1.64
TRIM35-203ENST00000521253 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
TRIM35-203ENST00000521253 USP40Q9NVE5 1235 aa25.29■■□□□ 1.64
TRIM35-203ENST00000521253 RAI14Q9P0K7 980 aa25.29■■□□□ 1.64
TRIM35-203ENST00000521253 PPP1R12BO60237 982 aaPredicted RBP25.28■■□□□ 1.64
TRIM35-203ENST00000521253 CYP2E1P05181 493 aaPredicted RBP25.28■■□□□ 1.64
TRIM35-203ENST00000521253 LDLRAD1Q5T700 205 aa25.28■■□□□ 1.64
TRIM35-203ENST00000521253 RASAL3Q86YV0 1011 aa25.28■■□□□ 1.64
TRIM35-203ENST00000521253 NSUN4Q96CB9 384 aaKnown RBP25.28■■□□□ 1.64
TRIM35-203ENST00000521253 ZAP70P43403 619 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 MAP3K11Q16584 847 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 BCL11AQ9H165 835 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 LRP2BPQ9P2M1 347 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 PCDHB15Q9Y5E8 787 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 MROH7-TTC4A0A0A0MT08 1334 aa25.27■■□□□ 1.64
TRIM35-203ENST00000521253 FOXN1O15353 648 aa25.26■■□□□ 1.63
TRIM35-203ENST00000521253 NFIAQ12857 509 aa25.26■■□□□ 1.63
TRIM35-203ENST00000521253 AIDAQ96BJ3 306 aa25.26■■□□□ 1.63
TRIM35-203ENST00000521253 USP2O75604 605 aaPredicted RBP25.25■■□□□ 1.63
TRIM35-203ENST00000521253 IFIT2P09913 472 aaKnown RBP25.25■■□□□ 1.63
TRIM35-203ENST00000521253 BTDP43251 543 aa25.25■■□□□ 1.63
TRIM35-203ENST00000521253 GSTO1P78417 241 aa25.25■■□□□ 1.63
TRIM35-203ENST00000521253 AKAP11Q9UKA4 1901 aa25.24■■□□□ 1.63
TRIM35-203ENST00000521253 GPR75-ASB3A0A0A6YYF3 556 aa25.24■■□□□ 1.63
TRIM35-203ENST00000521253 KIF23Q02241 960 aaPredicted RBP25.24■■□□□ 1.63
TRIM35-203ENST00000521253 PIH1D3Q9NQM4 214 aaKnown RBP25.24■■□□□ 1.63
TRIM35-203ENST00000521253 FAM198AQ9UFP1 575 aa25.24■■□□□ 1.63
TRIM35-203ENST00000521253 NDUFB9Q9Y6M9 179 aa25.24■■□□□ 1.63
TRIM35-203ENST00000521253 LDHCP07864 332 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 IREB2P48200 963 aaKnown RBP25.23■■□□□ 1.63
TRIM35-203ENST00000521253 TCP10Q12799 353 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 FAM151AQ8WW52 585 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 LRRCC1Q9C099 1032 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 DCTPP1Q9H773 170 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 MYH2Q9UKX2 1941 aa25.23■■□□□ 1.63
TRIM35-203ENST00000521253 RPAP1Q9BWH6 1393 aaPredicted RBP25.22■■□□□ 1.63
TRIM35-203ENST00000521253 CLMNQ96JQ2 1002 aa25.22■■□□□ 1.63
TRIM35-203ENST00000521253 BEGAINQ9BUH8 593 aa25.22■■□□□ 1.63
TRIM35-203ENST00000521253 RFX7Q2KHR2 1363 aa25.21■■□□□ 1.63
TRIM35-203ENST00000521253 SMARCA5O60264 1052 aaPredicted RBP25.21■■□□□ 1.63
TRIM35-203ENST00000521253 NAA16Q6N069 864 aaPredicted RBP25.21■■□□□ 1.63
TRIM35-203ENST00000521253 IDI2Q9BXS1 227 aa25.21■■□□□ 1.63
TRIM35-203ENST00000521253 UNCXA6NJT0 531 aa25.2■■□□□ 1.62
TRIM35-203ENST00000521253 WDHD1O75717 1129 aaPredicted RBP25.2■■□□□ 1.62
TRIM35-203ENST00000521253 CTCFP49711 727 aaPredicted RBP25.2■■□□□ 1.62
TRIM35-203ENST00000521253 RGS3P49796 1198 aa25.2■■□□□ 1.62
TRIM35-203ENST00000521253 RHBDL3P58872 404 aa25.2■■□□□ 1.62
TRIM35-203ENST00000521253 ZFPM1Q8IX07 1006 aa25.2■■□□□ 1.62
TRIM35-203ENST00000521253 ANTXR1Q9H6X2 564 aa25.2■■□□□ 1.62
TRIM35-203ENST00000521253 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.2■■□□□ 1.62
TRIM35-203ENST00000521253 MKRN3Q13064 507 aaKnown RBP25.19■■□□□ 1.62
TRIM35-203ENST00000521253 ANKRD13AQ8IZ07 590 aa25.19■■□□□ 1.62
TRIM35-203ENST00000521253 SLC10A4Q96EP9 437 aa25.19■■□□□ 1.62
TRIM35-203ENST00000521253 CSRNP1Q96S65 589 aa25.19■■□□□ 1.62
TRIM35-203ENST00000521253 IGSF3O75054 1194 aa25.18■■□□□ 1.62
TRIM35-203ENST00000521253 ENTPD3O75355 529 aa25.18■■□□□ 1.62
TRIM35-203ENST00000521253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.18■■□□□ 1.62
TRIM35-203ENST00000521253 HOOK2Q96ED9 719 aa25.18■■□□□ 1.62
TRIM35-203ENST00000521253 DDX4Q9NQI0 724 aaKnown RBP25.18■■□□□ 1.62
TRIM35-203ENST00000521253 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
TRIM35-203ENST00000521253 HSPA8P11142 646 aaKnown RBP25.17■■□□□ 1.62
TRIM35-203ENST00000521253 SPRYD7Q5W111 196 aa25.17■■□□□ 1.62
TRIM35-203ENST00000521253 ADGRA1Q86SQ6 560 aa25.17■■□□□ 1.62
TRIM35-203ENST00000521253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.17■■□□□ 1.62
TRIM35-203ENST00000521253 PICALMQ13492 652 aa25.16■■□□□ 1.62
TRIM35-203ENST00000521253 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.16■■□□□ 1.62
TRIM35-203ENST00000521253 MIGA2Q7L4E1 593 aa25.16■■□□□ 1.62
TRIM35-203ENST00000521253 CA12O43570 354 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 MAP4K4O95819 1239 aaPredicted RBP25.15■■□□□ 1.62
TRIM35-203ENST00000521253 LBX1P52954 281 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 MAP3K9P80192 1104 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 DCAF15Q66K64 600 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 REM2Q8IYK8 340 aaPredicted RBP25.15■■□□□ 1.62
TRIM35-203ENST00000521253 WNK4Q96J92 1243 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 NOL10Q9BSC4 688 aaKnown RBP25.15■■□□□ 1.62
TRIM35-203ENST00000521253 AATFQ9NY61 560 aaKnown RBP eCLIP25.15■■□□□ 1.62
TRIM35-203ENST00000521253 TSKSQ9UJT2 592 aa25.15■■□□□ 1.62
TRIM35-203ENST00000521253 SUPT16HQ9Y5B9 1047 aaKnown RBP25.15■■□□□ 1.62
TRIM35-203ENST00000521253 MAST2Q6P0Q8 1798 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 BAG3O95817 575 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 ATP5JP18859 108 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 VGLL4Q14135 290 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 COL13A1Q5TAT6 717 aaPredicted RBP25.14■■□□□ 1.62
TRIM35-203ENST00000521253 SH3BP5LQ7L8J4 393 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 SH3RF3Q8TEJ3 882 aaPredicted RBP25.14■■□□□ 1.62
TRIM35-203ENST00000521253 DNAJC2Q99543 621 aaKnown RBP25.14■■□□□ 1.62
TRIM35-203ENST00000521253 ELP3Q9H9T3 547 aa25.14■■□□□ 1.62
TRIM35-203ENST00000521253 NPM3O75607 178 aaKnown RBP25.13■■□□□ 1.61
TRIM35-203ENST00000521253 CYP7A1P22680 504 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 PPP4CP60510 307 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 MAP3K12Q12852 859 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 TTF1Q15361 905 aaPredicted RBP25.13■■□□□ 1.61
TRIM35-203ENST00000521253 TEX11Q8IYF3 940 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms