RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 ECM2O94769 699 aaPredicted RBP23.38■■□□□ 1.33
SNHG6-204ENST00000521127 DCAF15Q66K64 600 aa23.38■■□□□ 1.33
SNHG6-204ENST00000521127 C17orf99Q6UX52 265 aa23.38■■□□□ 1.33
SNHG6-204ENST00000521127 HOOK2Q96ED9 719 aa23.38■■□□□ 1.33
SNHG6-204ENST00000521127 ZNF341Q9BYN7 854 aa23.38■■□□□ 1.33
SNHG6-204ENST00000521127 MAST3O60307 1309 aa23.37■■□□□ 1.33
SNHG6-204ENST00000521127 KIF16BQ96L93 1317 aa23.37■■□□□ 1.33
SNHG6-204ENST00000521127 PPATQ06203 517 aa23.37■■□□□ 1.33
SNHG6-204ENST00000521127 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
SNHG6-204ENST00000521127 ANP32CO43423 234 aa23.36■■□□□ 1.33
SNHG6-204ENST00000521127 IFIT1P09914 478 aaKnown RBP23.36■■□□□ 1.33
SNHG6-204ENST00000521127 PUM3Q15397 648 aaKnown RBP23.36■■□□□ 1.33
SNHG6-204ENST00000521127 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.36■■□□□ 1.33
SNHG6-204ENST00000521127 CPA4Q9UI42 421 aa23.36■■□□□ 1.33
SNHG6-204ENST00000521127 ZNF112Q9UJU3 913 aa23.36■■□□□ 1.33
SNHG6-204ENST00000521127 H0YGN5 161 aa23.35■■□□□ 1.33
SNHG6-204ENST00000521127 GNRH1P01148 92 aa23.35■■□□□ 1.33
SNHG6-204ENST00000521127 RFX5P48382 616 aaPredicted RBP23.35■■□□□ 1.33
SNHG6-204ENST00000521127 PRMT2P55345 433 aa23.35■■□□□ 1.33
SNHG6-204ENST00000521127 FAM151AQ8WW52 585 aa23.35■■□□□ 1.33
SNHG6-204ENST00000521127 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 ADGRA2Q96PE1 1338 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 MOGSQ13724 837 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 MTFR1Q15390 333 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 ANKRD23Q86SG2 305 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 FAM9BQ8IZU0 186 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 SHISA4Q96DD7 197 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 TRIM47Q96LD4 638 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 KCNH4Q9UQ05 1017 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 DAGLAQ9Y4D2 1042 aa23.34■■□□□ 1.33
SNHG6-204ENST00000521127 EYA2O00167 538 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 PSMC4P43686 418 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 TCP10Q12799 353 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 NFIAQ12857 509 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 DIXDC1Q155Q3 683 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 WDR66Q8TBY9 1149 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 SRRDQ9UH36 339 aa23.33■■□□□ 1.33
SNHG6-204ENST00000521127 AK9Q5TCS8 1911 aa23.32■■□□□ 1.32
SNHG6-204ENST00000521127 MYH13Q9UKX3 1938 aa23.32■■□□□ 1.32
SNHG6-204ENST00000521127 PDHXO00330 501 aa23.32■■□□□ 1.32
SNHG6-204ENST00000521127 PTPRCP08575 1304 aa23.32■■□□□ 1.32
SNHG6-204ENST00000521127 SLC5A1P13866 664 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 OSBPP22059 807 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 ATG9AQ7Z3C6 839 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 SSH1Q8WYL5 1049 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 LPIN2Q92539 896 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 FAM198AQ9UFP1 575 aa23.31■■□□□ 1.32
SNHG6-204ENST00000521127 PRDX5P30044 214 aa23.3■■□□□ 1.32
SNHG6-204ENST00000521127 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
SNHG6-204ENST00000521127 ZFPM1Q8IX07 1006 aa23.3■■□□□ 1.32
SNHG6-204ENST00000521127 FMNL1O95466 1100 aaPredicted RBP23.28■■□□□ 1.32
SNHG6-204ENST00000521127 GRK4P32298 578 aa23.28■■□□□ 1.32
SNHG6-204ENST00000521127 GPAT2Q6NUI2 795 aa23.28■■□□□ 1.32
SNHG6-204ENST00000521127 HOXD10P28358 340 aa23.27■■□□□ 1.32
SNHG6-204ENST00000521127 RAET1EQ8TD07 263 aa23.27■■□□□ 1.32
SNHG6-204ENST00000521127 USP40Q9NVE5 1235 aa23.27■■□□□ 1.32
SNHG6-204ENST00000521127 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
SNHG6-204ENST00000521127 BCRP11274 1271 aa23.26■■□□□ 1.31
SNHG6-204ENST00000521127 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
SNHG6-204ENST00000521127 CXCL11O14625 94 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 LDHBP07195 334 aaKnown RBP23.25■■□□□ 1.31
SNHG6-204ENST00000521127 CYP2C8P10632 490 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 CCL5P13501 91 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 CHRDL2Q6WN34 429 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 UBE2Q1Q7Z7E8 422 aa23.25■■□□□ 1.31
SNHG6-204ENST00000521127 PHF20L1A8MW92 1017 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 GJB1P08034 283 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 GJA8P48165 433 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 PRKCZQ05513 592 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 DPF3Q92784 378 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 PARK7Q99497 189 aaKnown RBP23.24■■□□□ 1.31
SNHG6-204ENST00000521127 SIL1Q9H173 461 aa23.24■■□□□ 1.31
SNHG6-204ENST00000521127 PHKA1P46020 1223 aa23.23■■□□□ 1.31
SNHG6-204ENST00000521127 NKX2-3Q8TAU0 364 aa23.23■■□□□ 1.31
SNHG6-204ENST00000521127 GABRQQ9UN88 632 aa23.23■■□□□ 1.31
SNHG6-204ENST00000521127 SALL1Q9NSC2 1324 aa23.23■■□□□ 1.31
SNHG6-204ENST00000521127 MGAMO43451 1857 aa23.23■■□□□ 1.31
SNHG6-204ENST00000521127 CIAO1O76071 339 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 SLURP2P0DP57 97 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 RGS3P49796 1198 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 SH3BP5LQ7L8J4 393 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 RNF208Q9H0X6 261 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 GNL3LQ9NVN8 582 aaKnown RBP23.22■■□□□ 1.31
SNHG6-204ENST00000521127 CEP126Q9P2H0 1117 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 BIN2Q9UBW5 565 aaPredicted RBP23.22■■□□□ 1.31
SNHG6-204ENST00000521127 ZHX2Q9Y6X8 837 aa23.22■■□□□ 1.31
SNHG6-204ENST00000521127 RANBP2P49792 3224 aaKnown RBP23.22■■□□□ 1.31
SNHG6-204ENST00000521127 FCGRTP55899 365 aa23.21■■□□□ 1.31
SNHG6-204ENST00000521127 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
SNHG6-204ENST00000521127 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
SNHG6-204ENST00000521127 FBXO3Q9UK99 471 aa23.21■■□□□ 1.31
SNHG6-204ENST00000521127 DENND2AQ9ULE3 1009 aa23.21■■□□□ 1.31
SNHG6-204ENST00000521127 MYH2Q9UKX2 1941 aa23.21■■□□□ 1.31
SNHG6-204ENST00000521127 A0A0G2JLL6 359 aaPredicted RBP23.2■■□□□ 1.3
SNHG6-204ENST00000521127 E9PSI1 815 aa23.2■■□□□ 1.3
SNHG6-204ENST00000521127 PTPRAP18433 802 aa23.2■■□□□ 1.3
SNHG6-204ENST00000521127 PRRT2Q7Z6L0 340 aaPredicted RBP23.2■■□□□ 1.3
SNHG6-204ENST00000521127 SCYL3Q8IZE3 742 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms