RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 ESR2Q92731 530 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 ALDH8A1Q9H2A2 487 aaPredicted RBP13.18□□□□□ -0.3
CLK4-206ENST00000520878 NEDD4P46934 1319 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 USP17L21D6R901 530 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 ANTXR2P58335 489 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
CLK4-206ENST00000520878 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
CLK4-206ENST00000520878 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 TNS2Q63HR2 1409 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 GNAT2P19087 354 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 KRT40Q6A162 431 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 PDILTQ8N807 584 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 COL18A1P39060 1754 aa13.18□□□□□ -0.3
CLK4-206ENST00000520878 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 MCM9Q9NXL9 1143 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 PPARAQ07869 468 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
CLK4-206ENST00000520878 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
CLK4-206ENST00000520878 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 XBP1P17861 261 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 KLRK1P26718 216 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
CLK4-206ENST00000520878 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
CLK4-206ENST00000520878 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
CLK4-206ENST00000520878 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
CLK4-206ENST00000520878 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
CLK4-206ENST00000520878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
CLK4-206ENST00000520878 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
CLK4-206ENST00000520878 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 CDC27P30260 824 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
CLK4-206ENST00000520878 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 ZKSCAN5Q9Y2L8 839 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 SMC2O95347 1197 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 FGFR2P21802 821 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 PRDX5P30044 214 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
CLK4-206ENST00000520878 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLK4-206ENST00000520878 TRIM37O94972 964 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 TPM4P67936 248 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 VPS72Q15906 364 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 WASF1Q92558 559 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
CLK4-206ENST00000520878 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
CLK4-206ENST00000520878 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
CLK4-206ENST00000520878 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
CLK4-206ENST00000520878 SAP30BPQ9UHR5 308 aaKnown RBP13.14□□□□□ -0.31
CLK4-206ENST00000520878 ELP1O95163 1332 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 BTBD18B2RXH4 712 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
CLK4-206ENST00000520878 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
CLK4-206ENST00000520878 FOXP2O15409 715 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 UFL1O94874 794 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 LDHBP07195 334 aaKnown RBP13.13□□□□□ -0.31
CLK4-206ENST00000520878 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
CLK4-206ENST00000520878 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 TNKSO95271 1327 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CLK4-206ENST00000520878 SYKP43405 635 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms