RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 DCAF15Q66K64 600 aa24.41■■□□□ 1.5
PABPC1-215ENST00000520804 CDC42EP5Q6NZY7 148 aa24.41■■□□□ 1.5
PABPC1-215ENST00000520804 FAM151AQ8WW52 585 aa24.41■■□□□ 1.5
PABPC1-215ENST00000520804 TNRC18O15417 2968 aaPredicted RBP24.4■■□□□ 1.5
PABPC1-215ENST00000520804 ADORA1P30542 326 aa24.4■■□□□ 1.5
PABPC1-215ENST00000520804 CCDC102BQ68D86 513 aa24.4■■□□□ 1.5
PABPC1-215ENST00000520804 ERO1BQ86YB8 467 aa24.4■■□□□ 1.5
PABPC1-215ENST00000520804 CD99L2Q8TCZ2 262 aa24.4■■□□□ 1.5
PABPC1-215ENST00000520804 ZKSCAN4Q969J2 545 aaPredicted RBP24.4■■□□□ 1.5
PABPC1-215ENST00000520804 SRGAP3O43295 1099 aa24.39■■□□□ 1.49
PABPC1-215ENST00000520804 SP3Q02447 781 aa24.39■■□□□ 1.49
PABPC1-215ENST00000520804 MTX1Q13505 466 aa24.39■■□□□ 1.49
PABPC1-215ENST00000520804 ZNF341Q9BYN7 854 aa24.39■■□□□ 1.49
PABPC1-215ENST00000520804 IPO8O15397 1037 aaKnown RBP24.38■■□□□ 1.49
PABPC1-215ENST00000520804 TIMM10P62072 90 aa24.38■■□□□ 1.49
PABPC1-215ENST00000520804 NFIAQ12857 509 aa24.38■■□□□ 1.49
PABPC1-215ENST00000520804 MIGA2Q7L4E1 593 aa24.38■■□□□ 1.49
PABPC1-215ENST00000520804 FAM43AQ8N2R8 423 aa24.38■■□□□ 1.49
PABPC1-215ENST00000520804 TRIM27P14373 513 aa24.37■■□□□ 1.49
PABPC1-215ENST00000520804 TCP10Q12799 353 aa24.37■■□□□ 1.49
PABPC1-215ENST00000520804 TAF1CQ15572 869 aaPredicted RBP24.37■■□□□ 1.49
PABPC1-215ENST00000520804 ZGPATQ8N5A5 531 aaKnown RBP24.37■■□□□ 1.49
PABPC1-215ENST00000520804 ZFYVE28Q9HCC9 887 aa24.37■■□□□ 1.49
PABPC1-215ENST00000520804 USP40Q9NVE5 1235 aa24.37■■□□□ 1.49
PABPC1-215ENST00000520804 IRF6O14896 467 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 CETPP11597 493 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 PPIL2Q13356 520 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 ATF7IPQ6VMQ6 1270 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 EFCC1Q9HA90 598 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 FAM198AQ9UFP1 575 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 PTPN22Q9Y2R2 807 aa24.36■■□□□ 1.49
PABPC1-215ENST00000520804 A0A1B0GUL7 405 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 BCAR3O75815 825 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 CAP1Q01518 475 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 TFCP2Q12800 502 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 SNAPC2Q13487 334 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 RASGRF1Q13972 1273 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 ZNF112Q9UJU3 913 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 TNNQ9UQP3 1299 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 AKAP2Q9Y2D5 859 aa24.35■■□□□ 1.49
PABPC1-215ENST00000520804 PDS5AQ29RF7 1337 aaKnown RBP24.35■■□□□ 1.49
PABPC1-215ENST00000520804 INPP5BP32019 993 aa24.34■■□□□ 1.49
PABPC1-215ENST00000520804 PPATQ06203 517 aa24.34■■□□□ 1.49
PABPC1-215ENST00000520804 FRAT1Q92837 279 aaPredicted RBP24.34■■□□□ 1.49
PABPC1-215ENST00000520804 XAGE2Q96GT9 111 aa24.34■■□□□ 1.49
PABPC1-215ENST00000520804 ZCCHC17Q9NP64 241 aaKnown RBP24.34■■□□□ 1.49
PABPC1-215ENST00000520804 GAKO14976 1311 aa24.34■■□□□ 1.49
PABPC1-215ENST00000520804 GNAI2P04899 355 aa24.33■■□□□ 1.49
PABPC1-215ENST00000520804 MYH2Q9UKX2 1941 aa24.33■■□□□ 1.49
PABPC1-215ENST00000520804 AK9Q5TCS8 1911 aa24.32■■□□□ 1.48
PABPC1-215ENST00000520804 BTBD19C9JJ37 291 aa24.32■■□□□ 1.48
PABPC1-215ENST00000520804 WDHD1O75717 1129 aaPredicted RBP24.32■■□□□ 1.48
PABPC1-215ENST00000520804 MVPQ14764 893 aaKnown RBP24.32■■□□□ 1.48
PABPC1-215ENST00000520804 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
PABPC1-215ENST00000520804 ZFPM1Q8IX07 1006 aa24.32■■□□□ 1.48
PABPC1-215ENST00000520804 ABCF2Q9UG63 623 aa24.32■■□□□ 1.48
PABPC1-215ENST00000520804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.32■■□□□ 1.48
PABPC1-215ENST00000520804 CLUAP1Q96AJ1 413 aa24.31■■□□□ 1.48
PABPC1-215ENST00000520804 IDI2Q9BXS1 227 aa24.31■■□□□ 1.48
PABPC1-215ENST00000520804 HTTP42858 3142 aa24.3■■□□□ 1.48
PABPC1-215ENST00000520804 TLR2O60603 784 aa24.3■■□□□ 1.48
PABPC1-215ENST00000520804 ARHGEF6Q15052 776 aa24.3■■□□□ 1.48
PABPC1-215ENST00000520804 NOL9Q5SY16 702 aaKnown RBP24.3■■□□□ 1.48
PABPC1-215ENST00000520804 SPTY2D1Q68D10 685 aaPredicted RBP24.3■■□□□ 1.48
PABPC1-215ENST00000520804 SLF2Q8IX21 1173 aa24.3■■□□□ 1.48
PABPC1-215ENST00000520804 FAM163AQ96GL9 167 aaPredicted RBP24.3■■□□□ 1.48
PABPC1-215ENST00000520804 RFX7Q2KHR2 1363 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 PNMA6EA0A0J9YXQ4 647 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 ENTPD3O75355 529 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 RGS3P49796 1198 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
PABPC1-215ENST00000520804 ARMC5Q96C12 935 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 NEUROD6Q96NK8 337 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 PDE4DIPQ5VU43 2346 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 ATRNL1Q5VV63 1379 aa24.29■■□□□ 1.48
PABPC1-215ENST00000520804 KCNH4Q9UQ05 1017 aa24.28■■□□□ 1.48
PABPC1-215ENST00000520804 DOCK2Q92608 1830 aa24.28■■□□□ 1.48
PABPC1-215ENST00000520804 ZKSCAN2Q63HK3 967 aa24.27■■□□□ 1.48
PABPC1-215ENST00000520804 ERICH6Q7L0X2 663 aa24.27■■□□□ 1.48
PABPC1-215ENST00000520804 TMEM57Q8N5G2 664 aa24.27■■□□□ 1.48
PABPC1-215ENST00000520804 HMG20BQ9P0W2 317 aa24.27■■□□□ 1.48
PABPC1-215ENST00000520804 MROH7-TTC4A0A0A0MT08 1334 aa24.27■■□□□ 1.48
PABPC1-215ENST00000520804 POTEFA5A3E0 1075 aa24.26■■□□□ 1.47
PABPC1-215ENST00000520804 SLC34A2O95436 690 aa24.26■■□□□ 1.47
PABPC1-215ENST00000520804 BTDP43251 543 aa24.26■■□□□ 1.47
PABPC1-215ENST00000520804 G3BP1Q13283 466 aaKnown RBP eCLIP24.26■■□□□ 1.479e-14■■■■□ 26.5
PABPC1-215ENST00000520804 SH3BP5LQ7L8J4 393 aa24.26■■□□□ 1.47
PABPC1-215ENST00000520804 ANKRD23Q86SG2 305 aa24.26■■□□□ 1.47
PABPC1-215ENST00000520804 RBBP6Q7Z6E9 1792 aaKnown RBP24.25■■□□□ 1.47
PABPC1-215ENST00000520804 PHF20L1A8MW92 1017 aa24.25■■□□□ 1.47
PABPC1-215ENST00000520804 MECOMQ03112 1051 aa24.25■■□□□ 1.47
PABPC1-215ENST00000520804 GORABQ5T7V8 394 aa24.25■■□□□ 1.47
PABPC1-215ENST00000520804 PRPF38BQ5VTL8 546 aaKnown RBP24.25■■□□□ 1.47
PABPC1-215ENST00000520804 GPR75-ASB3A0A0A6YYF3 556 aa24.24■■□□□ 1.47
PABPC1-215ENST00000520804 LACTBP83111 547 aaPredicted RBP24.24■■□□□ 1.47
PABPC1-215ENST00000520804 MAP3K10Q02779 954 aa24.24■■□□□ 1.47
PABPC1-215ENST00000520804 ZSCAN29Q8IWY8 852 aaPredicted RBP24.24■■□□□ 1.47
PABPC1-215ENST00000520804 SPATA5Q8NB90 893 aa24.24■■□□□ 1.47
PABPC1-215ENST00000520804 ZNF384Q8TF68 577 aa24.24■■□□□ 1.47
PABPC1-215ENST00000520804 DDX4Q9NQI0 724 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms