RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 PHKBQ93100 1093 aa11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 MAFGO15525 162 aa11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 RNF40O75150 1001 aa11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 PDE4BQ07343 736 aa11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
PDGFRB-207ENST00000520579 UHRF1BP1LA0JNW5 1464 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 RPGRIP1LQ68CZ1 1315 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 PHLPP2Q6ZVD8 1323 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 CDC25AP30304 524 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 NF2P35240 595 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ARL10Q8N8L6 244 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ENGASEQ8NFI3 743 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 KLHL33A6NCF5 533 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ATP1A2P50993 1020 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 NFXL1Q6ZNB6 911 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ADCY9O60503 1353 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ERLIN2O94905 339 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 TFCP2Q12800 502 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
PDGFRB-207ENST00000520579 ACEP12821 1306 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 FAM170AA1A519 330 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CTAGE15A4D2H0 777 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 TEX33O43247 280 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CTAGE8P0CG41 777 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 GCKP35557 465 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 TRDNQ13061 729 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 MEX3CQ5U5Q3 659 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CTAGE6Q86UF2 777 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 MICU3Q86XE3 530 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CEP57Q86XR8 500 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CTAGE4Q8IX94 777 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 RABGGTAQ92696 567 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CRACR2AQ9BSW2 395 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 TRIM10Q9UDY6 481 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 PCDHA5Q9Y5H7 936 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 LRRIQ3A6PVS8 624 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 ARHGAP6O43182 974 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 AP1G2O75843 785 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CDC27P30260 824 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 TIMM10P62072 90 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 NCAPHQ15003 741 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 AFAP1L1Q8TED9 768 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CAPN7Q9Y6W3 813 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 KIF28PB7ZC32 967 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 EPB41L2O43491 1005 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 BEND3Q5T5X7 828 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 KCTD16Q68DU8 428 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 RPUSD2Q8IZ73 545 aaKnown RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 RMI1Q9H9A7 625 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 ATG3Q9NT62 314 aa11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 BSDC1Q9NW68 430 aaPredicted RBP11.47□□□□□ -0.57
PDGFRB-207ENST00000520579 CCDC175P0C221 793 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 POLA2Q14181 598 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 RINLQ6ZS11 566 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 LINC00301Q8NCQ3 95 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 N4BP2L2Q92802 583 aaPredicted RBP11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 ZPR1O75312 459 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 ACTN3Q08043 901 aaPredicted RBP11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
PDGFRB-207ENST00000520579 SLC39A6Q13433 755 aa11.46□□□□□ -0.58
PDGFRB-207ENST00000520579 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.58
PDGFRB-207ENST00000520579 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.58
PDGFRB-207ENST00000520579 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.58
PDGFRB-207ENST00000520579 AOX1Q06278 1338 aa11.46□□□□□ -0.58
PDGFRB-207ENST00000520579 BTBD11A6QL63 1104 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 ADALQ6DHV7 355 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 DHX32Q7L7V1 743 aaKnown RBP11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 SRGAP1Q7Z6B7 1085 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 MYD88Q99836 296 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 ANKZF1Q9H8Y5 726 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 VEZTQ9HBM0 779 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 MROH2AA6NES4 1674 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 HIP1O00291 1037 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 CUTAO60888 179 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 KRT32Q14532 448 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
PDGFRB-207ENST00000520579 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms