RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 F8W031 263 aaPredicted RBP13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 AOPEPQ8N6M6 819 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
ERGIC1-208ENST00000520399 SPTLC2O15270 562 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 OPA1O60313 960 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 ATP2C2O75185 946 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 BICD1Q96G01 975 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 DISP1Q96F81 1524 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 SPAG1Q07617 926 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 JADE2Q9NQC1 790 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 TACC1O75410 805 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 GNG11P61952 73 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 ANKS4BQ8N8V4 417 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 VCXQ9H320 206 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 IL13P35225 146 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
ERGIC1-208ENST00000520399 ATP2A1O14983 1001 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 TOM1O60784 492 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 ALDH3A1P30838 453 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 LRRC23Q53EV4 343 aaPredicted RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 INTS4Q96HW7 963 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 GEMIN8Q9NWZ8 242 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 NEDD9Q14511 834 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 MCM6Q14566 821 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 DNAJC25Q9H1X3 360 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 PLCG2P16885 1265 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 CYLC1P35663 651 aaPredicted RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 MCTP2Q6DN12 878 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 CCDC117Q8IWD4 279 aaPredicted RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 CALML3P27482 149 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 USP37Q86T82 979 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 CCT6BQ92526 530 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 MMRN2Q9H8L6 949 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■□□□□ 11
ERGIC1-208ENST00000520399 ATP10AO60312 1499 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
ERGIC1-208ENST00000520399 TRIM75PA6NK02 468 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 PRPHP41219 470 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 ZNF365Q70YC5 407 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 BRAPQ7Z569 592 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 DHX58Q96C10 678 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 BUB1BO60566 1050 aaPredicted RBP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 CFAP157Q5JU67 520 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 CHST3Q7LGC8 479 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 MIGA1Q8NAN2 632 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 AOX1Q06278 1338 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 PSMA7O14818 248 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 ASIC1P78348 528 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
ERGIC1-208ENST00000520399 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.23
ERGIC1-208ENST00000520399 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 SKILP12757 684 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 TYRO3Q06418 890 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 HDXQ7Z353 690 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 MCM9Q9NXL9 1143 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 CRCPO75575 148 aa13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
ERGIC1-208ENST00000520399 AKR1B10O60218 316 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 KRT13P13646 458 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 TBX22Q9Y458 520 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 CIB2O75838 187 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 KCNA6P17658 529 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 GOLGA1Q92805 767 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 STIM2Q9P246 746 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 SLC8A1P32418 973 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 G2E3Q7L622 706 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 IRAK4Q9NWZ3 460 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 DENND2AQ9ULE3 1009 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 LDHBP07195 334 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms