RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 FAM83AQ86UY5 434 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-202ENST00000519219 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
TRIM35-202ENST00000519219 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
TRIM35-202ENST00000519219 CETPP11597 493 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 PPIL2Q13356 520 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 SNAPC2Q13487 334 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 MOGSQ13724 837 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
TRIM35-202ENST00000519219 CDC42EP5Q6NZY7 148 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 ZFPM1Q8IX07 1006 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 TMOD2Q9NZR1 351 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 ADGRA2Q96PE1 1338 aa10.97□□□□□ -0.65
TRIM35-202ENST00000519219 EYA2O00167 538 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRIM35-202ENST00000519219 MTFR1Q15390 333 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 SLC4A8Q2Y0W8 1093 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 FKBP1CQ5VVH2 108 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 HHIPL2Q6UWX4 724 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 GCC1Q96CN9 775 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 SHISA4Q96DD7 197 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 TRIM47Q96LD4 638 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 SIL1Q9H173 461 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.65
TRIM35-202ENST00000519219 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 ATRNL1Q5VV63 1379 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 MAST3O60307 1309 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 PTPRCP08575 1304 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 KIF16BQ96L93 1317 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
TRIM35-202ENST00000519219 IFIT1P09914 478 aaKnown RBP10.95□□□□□ -0.66
TRIM35-202ENST00000519219 SLC5A1P13866 664 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 ADORA1P30542 326 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 PHKA1P46020 1223 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 C17orf99Q6UX52 265 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.95□□□□□ -0.66
TRIM35-202ENST00000519219 ZNF112Q9UJU3 913 aa10.95□□□□□ -0.66
TRIM35-202ENST00000519219 PA2G4Q9UQ80 394 aaKnown RBP10.95□□□□□ -0.66
TRIM35-202ENST00000519219 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
TRIM35-202ENST00000519219 H0YGN5 161 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 PDHXO00330 501 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 OSBPP22059 807 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 PSMC4P43686 418 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 PPATQ06203 517 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 DCAF15Q66K64 600 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 FAM151AQ8WW52 585 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 LPIN2Q92539 896 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 ZCCHC17Q9NP64 241 aaKnown RBP10.94□□□□□ -0.66
TRIM35-202ENST00000519219 KCNH4Q9UQ05 1017 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 ALPK3Q96L96 1907 aa10.94□□□□□ -0.66
TRIM35-202ENST00000519219 ATAD5Q96QE3 1844 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 RFX7Q2KHR2 1363 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 CYP2C8P10632 490 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 ATP2B3Q16720 1220 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 NBPF11Q86T75 865 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 CCDC84Q86UT8 332 aaPredicted RBP10.93□□□□□ -0.66
TRIM35-202ENST00000519219 WDR66Q8TBY9 1149 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 USP40Q9NVE5 1235 aa10.93□□□□□ -0.66
TRIM35-202ENST00000519219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.93□□□□□ -0.66
TRIM35-202ENST00000519219 PHF20L1A8MW92 1017 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 KIF22Q14807 665 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 NOL9Q5SY16 702 aaKnown RBP10.92□□□□□ -0.66
TRIM35-202ENST00000519219 DDX4Q9NQI0 724 aaKnown RBP10.92□□□□□ -0.66
TRIM35-202ENST00000519219 SMC4Q9NTJ3 1288 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 SRRDQ9UH36 339 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 GABRQQ9UN88 632 aa10.92□□□□□ -0.66
TRIM35-202ENST00000519219 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
TRIM35-202ENST00000519219 E9PSI1 815 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
TRIM35-202ENST00000519219 UBTFL1P0CB47 393 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-202ENST00000519219 BCRP11274 1271 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 RGS3P49796 1198 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 PRKCZQ05513 592 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
TRIM35-202ENST00000519219 CDK5RAP2Q96SN8 1893 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 SIPA1L1O43166 1804 aa10.91□□□□□ -0.66
TRIM35-202ENST00000519219 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-202ENST00000519219 FAM196BA6NMK8 535 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 CIAO1O76071 339 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-202ENST00000519219 CCL5P13501 91 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 GRK4P32298 578 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 RASGRF1Q13972 1273 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 UBE2Q1Q7Z7E8 422 aa10.9□□□□□ -0.66
TRIM35-202ENST00000519219 ZNF384Q8TF68 577 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms