RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 USP40Q9NVE5 1235 aa16.27■□□□□ 0.2
TMEM55A-203ENST00000518869 DAGLAQ9Y4D2 1042 aa16.27■□□□□ 0.2
TMEM55A-203ENST00000518869 WDHD1O75717 1129 aaPredicted RBP16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 FAM151AQ8WW52 585 aa16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
TMEM55A-203ENST00000518869 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 WNK4Q96J92 1243 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 ARAP2Q8WZ64 1704 aa16.25■□□□□ 0.19
TMEM55A-203ENST00000518869 AOX1Q06278 1338 aa16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 CEP85Q6P2H3 762 aa16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 ZNF341Q9BYN7 854 aa16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 RPAP1Q9BWH6 1393 aaPredicted RBP16.24■□□□□ 0.19
TMEM55A-203ENST00000518869 PCNTO95613 3336 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 ENTPD3O75355 529 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 CAPN15O75808 1086 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 CACNB3P54284 484 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 RAI14Q9P0K7 980 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
TMEM55A-203ENST00000518869 GAKO14976 1311 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 BAG3O95817 575 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 GTF2A2P52657 109 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 TCP10Q12799 353 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 OPTNQ96CV9 577 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 CLMNQ96JQ2 1002 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
TMEM55A-203ENST00000518869 PLCG2P16885 1265 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 MECOMQ03112 1051 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 DGKZQ13574 1117 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 ERO1BQ86YB8 467 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 IFNL1Q8IU54 200 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 ZSCAN29Q8IWY8 852 aaPredicted RBP16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 ABHD8Q96I13 439 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 WRNIP1Q96S55 665 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 ELP3Q9H9T3 547 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 COG6Q9Y2V7 657 aa16.21■□□□□ 0.19
TMEM55A-203ENST00000518869 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 GPR75-ASB3A0A0A6YYF3 556 aa16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 VGLL4Q14135 290 aa16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 CLASRPQ8N2M8 674 aaKnown RBP16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 SSC5DA1L4H1 1573 aa16.2■□□□□ 0.18
TMEM55A-203ENST00000518869 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 GPR25O00155 361 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 MCAMP43121 646 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 BTDP43251 543 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 ARHGEF6Q15052 776 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 MIGA2Q7L4E1 593 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 CTU1Q7Z7A3 348 aaKnown RBP16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
TMEM55A-203ENST00000518869 TESPA1A2RU30 521 aaPredicted RBP16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 SPDYE5A6NIY4 337 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 FKTNO75072 461 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 CETPP11597 493 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 RGS3P49796 1198 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 PPATQ06203 517 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 NAA16Q6N069 864 aaPredicted RBP16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 NSUN4Q96CB9 384 aaKnown RBP16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 MCOLN1Q9GZU1 580 aa16.18■□□□□ 0.18
TMEM55A-203ENST00000518869 NFIAQ12857 509 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 SNAPC2Q13487 334 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 AACSQ86V21 672 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.17■□□□□ 0.18
TMEM55A-203ENST00000518869 IFIT2P09913 472 aaKnown RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 PPIL2Q13356 520 aa16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
TMEM55A-203ENST00000518869 RHPN1Q8TCX5 695 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms