RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 DEFB115Q30KQ5 88 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 NAA16Q6N069 864 aaPredicted RBP26.78■■□□□ 1.88
VEGFA-217ENST00000518538 GPATCH3Q96I76 525 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 HHIPL1Q96JK4 782 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 ECHDC1Q9NTX5 307 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 USP40Q9NVE5 1235 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 ZBTB47Q9UFB7 747 aaPredicted RBP26.78■■□□□ 1.88
VEGFA-217ENST00000518538 PAPPA2Q9BXP8 1791 aa26.78■■□□□ 1.88
VEGFA-217ENST00000518538 IGHDP01880 384 aa26.77■■□□□ 1.88
VEGFA-217ENST00000518538 ANKRD45Q5TZF3 282 aa26.77■■□□□ 1.88
VEGFA-217ENST00000518538 FAM83AQ86UY5 434 aa26.77■■□□□ 1.88
VEGFA-217ENST00000518538 SMC5Q8IY18 1101 aa26.77■■□□□ 1.88
VEGFA-217ENST00000518538 DNAJC2Q99543 621 aaKnown RBP26.77■■□□□ 1.88
VEGFA-217ENST00000518538 BOLA2Q9H3K6 86 aa26.77■■□□□ 1.88
VEGFA-217ENST00000518538 IDH1O75874 414 aaKnown RBP26.76■■□□□ 1.87
VEGFA-217ENST00000518538 SUPT20HL1Q3ZLR7 823 aa26.76■■□□□ 1.87
VEGFA-217ENST00000518538 HAUS7Q99871 368 aa26.76■■□□□ 1.87
VEGFA-217ENST00000518538 DOCK2Q92608 1830 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 HUNKP57058 714 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 MAP3K12Q12852 859 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 TMED8Q6PL24 325 aaPredicted RBP26.75■■□□□ 1.87
VEGFA-217ENST00000518538 TEPSINQ96N21 525 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 TMEM39BQ9GZU3 492 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 SSC5DA1L4H1 1573 aa26.75■■□□□ 1.87
VEGFA-217ENST00000518538 GOLIM4O00461 696 aa26.74■■□□□ 1.87
VEGFA-217ENST00000518538 NBPF12Q5TAG4 269 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-217ENST00000518538 PAG1Q9NWQ8 432 aa26.74■■□□□ 1.87
VEGFA-217ENST00000518538 MYO5AQ9Y4I1 1855 aaKnown RBP26.74■■□□□ 1.87
VEGFA-217ENST00000518538 RPAP1Q9BWH6 1393 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-217ENST00000518538 MAP4K4O95819 1239 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-217ENST00000518538 RHBDL3P58872 404 aa26.73■■□□□ 1.87
VEGFA-217ENST00000518538 NOL10Q9BSC4 688 aaKnown RBP26.73■■□□□ 1.87
VEGFA-217ENST00000518538 IDI2Q9BXS1 227 aa26.73■■□□□ 1.87
VEGFA-217ENST00000518538 RFX7Q2KHR2 1363 aa26.72■■□□□ 1.87
VEGFA-217ENST00000518538 TTC41PQ6P2S7 1318 aa26.72■■□□□ 1.87
VEGFA-217ENST00000518538 NFIAQ12857 509 aa26.72■■□□□ 1.87
VEGFA-217ENST00000518538 TTLL12Q14166 644 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-217ENST00000518538 FAM198AQ9UFP1 575 aa26.72■■□□□ 1.87
VEGFA-217ENST00000518538 CEP350Q5VT06 3117 aa26.72■■□□□ 1.87
VEGFA-217ENST00000518538 BAG3O95817 575 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 CYP7A1P22680 504 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 VEGFBP49765 207 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 PAXIP1Q6ZW49 1069 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-217ENST00000518538 MOB2Q70IA6 237 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 ARMC9Q7Z3E5 817 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 ADGRA1Q86SQ6 560 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 CDAN1Q8IWY9 1227 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 MAGEB6Q8N7X4 407 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 OTUD7AQ8TE49 926 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-217ENST00000518538 FAM151AQ8WW52 585 aa26.71■■□□□ 1.87
VEGFA-217ENST00000518538 EDC3Q96F86 508 aaKnown RBP26.71■■□□□ 1.87
VEGFA-217ENST00000518538 PPP1R12BO60237 982 aaPredicted RBP26.7■■□□□ 1.86
VEGFA-217ENST00000518538 WDHD1O75717 1129 aaPredicted RBP26.7■■□□□ 1.86
VEGFA-217ENST00000518538 MX1P20591 662 aa26.7■■□□□ 1.86
VEGFA-217ENST00000518538 ECE1P42892 770 aa26.7■■□□□ 1.86
VEGFA-217ENST00000518538 TCP10Q12799 353 aa26.7■■□□□ 1.86
VEGFA-217ENST00000518538 TSHZ3Q63HK5 1081 aa26.7■■□□□ 1.86
VEGFA-217ENST00000518538 CAPNS2Q96L46 248 aa26.7■■□□□ 1.86
VEGFA-217ENST00000518538 SALL3Q9BXA9 1300 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 ENTPD3O75355 529 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 PLCG2P16885 1265 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 PPP4CP60510 307 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 PRKG1Q13976 671 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 CYP4F22Q6NT55 531 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 RGMBQ6NW40 437 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 JMYQ8N9B5 988 aa26.69■■□□□ 1.86
VEGFA-217ENST00000518538 AATFQ9NY61 560 aaKnown RBP eCLIP26.69■■□□□ 1.86
VEGFA-217ENST00000518538 ANGEL1Q9UNK9 670 aaKnown RBP26.69■■□□□ 1.86
VEGFA-217ENST00000518538 WDR33Q9C0J8 1336 aaKnown RBP26.68■■□□□ 1.86
VEGFA-217ENST00000518538 UBE2Q2LH0YL09 131 aa26.68■■□□□ 1.86
VEGFA-217ENST00000518538 ERC2O15083 957 aa26.68■■□□□ 1.86
VEGFA-217ENST00000518538 RGS3P49796 1198 aa26.68■■□□□ 1.86
VEGFA-217ENST00000518538 MAP3K11Q16584 847 aa26.68■■□□□ 1.86
VEGFA-217ENST00000518538 NPM3O75607 178 aaKnown RBP26.67■■□□□ 1.86
VEGFA-217ENST00000518538 PDE6AP16499 860 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 NUCB1Q02818 461 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 SLC9C2Q5TAH2 1124 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 B4GALNT3Q6L9W6 998 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 PI4K2BQ8TCG2 481 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 HOOK2Q96ED9 719 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 LNPKQ9C0E8 428 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 DDX4Q9NQI0 724 aaKnown RBP26.67■■□□□ 1.86
VEGFA-217ENST00000518538 FZD1Q9UP38 647 aa26.67■■□□□ 1.86
VEGFA-217ENST00000518538 GLRX3O76003 335 aaKnown RBP26.66■■□□□ 1.86
VEGFA-217ENST00000518538 CHD1LQ86WJ1 897 aa26.66■■□□□ 1.86
VEGFA-217ENST00000518538 CERS3Q8IU89 383 aa26.66■■□□□ 1.86
VEGFA-217ENST00000518538 TEX11Q8IYF3 940 aa26.66■■□□□ 1.86
VEGFA-217ENST00000518538 SH3RF3Q8TEJ3 882 aaPredicted RBP26.66■■□□□ 1.86
VEGFA-217ENST00000518538 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.66■■□□□ 1.863e-12■□□□□ 9.3
VEGFA-217ENST00000518538 ZNF157P51786 506 aaPredicted RBP26.65■■□□□ 1.86
VEGFA-217ENST00000518538 GRM1Q13255 1194 aa26.65■■□□□ 1.86
VEGFA-217ENST00000518538 PICALMQ13492 652 aa26.65■■□□□ 1.86
VEGFA-217ENST00000518538 LDLRAD1Q5T700 205 aa26.65■■□□□ 1.86
VEGFA-217ENST00000518538 ZFPM1Q8IX07 1006 aa26.65■■□□□ 1.86
VEGFA-217ENST00000518538 CCDC102AQ96A19 550 aa26.65■■□□□ 1.86
VEGFA-217ENST00000518538 USP2O75604 605 aaPredicted RBP26.64■■□□□ 1.86
VEGFA-217ENST00000518538 IREB2P48200 963 aaKnown RBP26.64■■□□□ 1.86
VEGFA-217ENST00000518538 MIGA1Q8NAN2 632 aa26.64■■□□□ 1.86
VEGFA-217ENST00000518538 STAP2Q9UGK3 403 aa26.64■■□□□ 1.86
VEGFA-217ENST00000518538 ZNF532Q9HCE3 1301 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms