RNA–Protein interactions for RNA: ENST00000518413.2

TMPRSS4-204, Transcript of transmembrane serine protease 4, human

TSL 2

Gene TMPRSS4, Length 700 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPRSS4-204	ENST00000518413	LARGE2	Q8N3Y3	721 aa		13.76	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SYT17	Q9BSW7	474 aa		13.76	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	MXD3	Q9BW11	206 aa		13.76	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ZSWIM6	Q9HCJ5	1215 aa		13.76	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SLC4A4	Q9Y6R1	1079 aa		13.76	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CD2BP2	O95400	341 aa	Known RBP	13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	VIL1	P09327	827 aa	Known RBP	13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	PRELP	P51888	382 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	GIMAP6	Q6P9H5	292 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	HHIPL2	Q6UWX4	724 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	STOX1	Q6ZVD7	989 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CERS3	Q8IU89	383 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SLF2	Q8IX21	1173 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	TBC1D2	Q9BYX2	928 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ZNRF3	Q9ULT6	936 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CDK5RAP2	Q96SN8	1893 aa		13.75	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	HDLBP	Q00341	1268 aa	Known RBP	13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	KRT32	Q14532	448 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	FBXW7	Q969H0	707 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	TTC14	Q96N46	770 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	GML	Q99445	158 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NBPF3	Q9H094	633 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	MKRN1	Q9UHC7	482 aa	Known RBP	13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	TTF2	Q9UNY4	1162 aa	Known RBP	13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	DAGLA	Q9Y4D2	1042 aa		13.74	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	TIAM2	Q8IVF5	1701 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	BAG3	O95817	575 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	PSMA5	P28066	241 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	BTD	P43251	543 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NEK4	P51957	841 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	RHBDL3	P58872	404 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	COL9A3	Q14050	684 aa	Predicted RBP	13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	IMMT	Q16891	758 aa	Known RBP	13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SDR42E1	Q8WUS8	393 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	JAKMIP1	Q96N16	626 aa	Known RBP	13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NACAP1	Q9BZK3	213 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ATP8A2	Q9NTI2	1148 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	FOCAD	Q5VW36	1801 aa		13.73	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	DICER1	Q9UPY3	1922 aa	Known RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SBF1	O95248	1867 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	MYO3B	Q8WXR4	1341 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413		E7EWF7	191 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	PSMD14	O00487	310 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ZNF213	O14771	459 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	APP	P05067	770 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CAST	P20810	708 aa	Known RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	RASSF7	Q02833	373 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	BECN1	Q14457	450 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	RUFY3	Q7L099	469 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	UPF3B	Q9BZI7	483 aa	Known RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NAPB	Q9H115	298 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ANAPC4	Q9UJX5	808 aa		13.72	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ADAMTSL1	Q8N6G6	1762 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	DDX60L	Q5H9U9	1706 aa	Known RBP	13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413		F8W031	263 aa	Predicted RBP	13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ST18	O60284	1047 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	PLCG2	P16885	1265 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	CXCL9	Q07325	125 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SBK1	Q52WX2	424 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ZDHHC15	Q96MV8	337 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	NEK1	Q96PY6	1258 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	SERPINA10	Q9UK55	444 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	TACC3	Q9Y6A5	838 aa		13.71	□□□□□ -0.21
TMPRSS4-204	ENST00000518413	ECM29	Q5VYK3	1845 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	FZD9	O00144	591 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	RAD17	O75943	681 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	CPA1	P15085	419 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	RPS6KB1	P23443	525 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	CRK	P46108	304 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	TDO2	P48775	406 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	SCNN1D	P51172	638 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	HAND2	P61296	217 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	EXOSC10	Q01780	885 aa	Known RBP	13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	CTR9	Q6PD62	1173 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	BLOC1S2	Q6QNY1	142 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	TBC1D10C	Q8IV04	446 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	KIAA0825	Q8IV33	1275 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	HSCB	Q8IWL3	235 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	AGBL3	Q8NEM8	1001 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	JDP2	Q8WYK2	163 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	TEKT1	Q969V4	418 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	NOL10	Q9BSC4	688 aa	Known RBP	13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	CYP46A1	Q9Y6A2	500 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	LAMB1	P07942	1786 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	NAV1	Q8NEY1	1877 aa		13.7	□□□□□ -0.22
TMPRSS4-204	ENST00000518413		K7ELQ4	463 aa	Predicted RBP	13.69	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	HMGB1	P09429	215 aa	Known RBP	13.69	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	FGR	P09769	529 aa		13.69	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
TMPRSS4-204	ENST00000518413	PPARA	Q07869	468 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms