RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 MYH8P13535 1937 aa12.64□□□□□ -0.39
SPIDR-204ENST00000517824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
SPIDR-204ENST00000517824 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 SYCE3A1L190 88 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 SEMA3EO15041 775 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 FOSBP53539 338 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 DNM1Q05193 864 aaKnown RBP12.63□□□□□ -0.39
SPIDR-204ENST00000517824 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
SPIDR-204ENST00000517824 COL4A1P02462 1669 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 ERICH2A1L162 156 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 JAK2O60674 1132 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 BCAMP50895 628 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
SPIDR-204ENST00000517824 ST5P78524 1137 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CCDC173Q0VFZ6 552 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 SCRN1Q12765 414 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-204ENST00000517824 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CHST3Q7LGC8 479 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 SPATA32Q96LK8 384 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-204ENST00000517824 KRT23Q9C075 422 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-204ENST00000517824 ABCF2Q9UG63 623 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 CFAP45Q9UL16 551 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
SPIDR-204ENST00000517824 MAGEB6P1A0A0J9YX57 407 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 CYP7A1P22680 504 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
SPIDR-204ENST00000517824 ALX1Q15699 326 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-204ENST00000517824 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
SPIDR-204ENST00000517824 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 CDK5RAP2Q96SN8 1893 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 ELP1O95163 1332 aa12.61□□□□□ -0.39
SPIDR-204ENST00000517824 TCRBV5S4A2TA0A5A2 114 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 GYG1P46976 350 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 MFSD6Q6ZSS7 791 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 STRBPQ96SI9 672 aaKnown RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 AGXT2Q9BYV1 514 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-204ENST00000517824 ZNF804BA4D1E1 1349 aa12.6□□□□□ -0.39
SPIDR-204ENST00000517824 GADD45BO75293 160 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 GNL2Q13823 731 aaKnown RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 TRIM29Q14134 588 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 TMEM67Q5HYA8 995 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 SMARCC2Q8TAQ2 1214 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
SPIDR-204ENST00000517824 PDS5AQ29RF7 1337 aaKnown RBP12.59□□□□□ -0.39
SPIDR-204ENST00000517824 MYH1P12882 1939 aa12.58□□□□□ -0.39
SPIDR-204ENST00000517824 A0A0G2JLW4 131 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 B4E1Z4 1266 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-204ENST00000517824 RRP12Q5JTH9 1297 aaKnown RBP12.58□□□□□ -0.4
SPIDR-204ENST00000517824 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 GAS2L3Q86XJ1 694 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
SPIDR-204ENST00000517824 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 NCOA5Q9HCD5 579 aaKnown RBP12.58□□□□□ -0.4
SPIDR-204ENST00000517824 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
SPIDR-204ENST00000517824 SNAP23O00161 211 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 IFIT3O14879 490 aaKnown RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 ZBTB43O43298 467 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 SLC3A2P08195 630 aaKnown RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 HIBADHP31937 336 aaKnown RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 RESTQ13127 1097 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 COL9A3Q14050 684 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
SPIDR-204ENST00000517824 TMED8Q6PL24 325 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-204ENST00000517824 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms