RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 RIOK1Q9BRS2 568 aaKnown RBP31.15■■■□□ 2.58
COL13A1-210ENST00000517713 KRT23Q9C075 422 aa31.15■■■□□ 2.58
COL13A1-210ENST00000517713 TXNRD3Q86VQ6 643 aa31.14■■■□□ 2.58
COL13A1-210ENST00000517713 LEMD3Q9Y2U8 911 aa31.14■■■□□ 2.58
COL13A1-210ENST00000517713 RBM6P78332 1123 aaKnown RBP31.14■■■□□ 2.57
COL13A1-210ENST00000517713 STAG1Q8WVM7 1258 aa31.14■■■□□ 2.57
COL13A1-210ENST00000517713 SCAND2PQ9GZW5 306 aaPredicted RBP31.14■■■□□ 2.57
COL13A1-210ENST00000517713 TACC3Q9Y6A5 838 aa31.14■■■□□ 2.57
COL13A1-210ENST00000517713 ELP1O95163 1332 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 ZBTB22O15209 634 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 TPRNQ4KMQ1 711 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 TTC6Q86TZ1 520 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 IGDCC4Q8TDY8 1250 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 ZNF384Q8TF68 577 aa31.13■■■□□ 2.57
COL13A1-210ENST00000517713 PPFIA3O75145 1194 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 FDPSP14324 419 aaKnown RBP31.12■■■□□ 2.57
COL13A1-210ENST00000517713 FOSBP53539 338 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 CRY2Q49AN0 593 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 SDR42E1Q8WUS8 393 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 CHAF1AQ13111 956 aaPredicted RBP31.12■■■□□ 2.57
COL13A1-210ENST00000517713 ZNF772Q68DY9 489 aaPredicted RBP31.12■■■□□ 2.57
COL13A1-210ENST00000517713 RAB11FIP4Q86YS3 637 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 NSUN4Q96CB9 384 aaKnown RBP31.12■■■□□ 2.57
COL13A1-210ENST00000517713 ZSWIM5Q9P217 1185 aa31.12■■■□□ 2.57
COL13A1-210ENST00000517713 KDM4AO75164 1064 aa31.11■■■□□ 2.57
COL13A1-210ENST00000517713 TFIP11Q9UBB9 837 aaKnown RBP31.11■■■□□ 2.57
COL13A1-210ENST00000517713 XDHP47989 1333 aa31.11■■■□□ 2.57
COL13A1-210ENST00000517713 CPLX1O14810 134 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 DYNLL1P63167 89 aaKnown RBP31.1■■■□□ 2.57
COL13A1-210ENST00000517713 MECOMQ03112 1051 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 PPARAQ07869 468 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 TMEM67Q5HYA8 995 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 CCDC183Q5T5S1 534 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 LY9Q9HBG7 655 aa31.1■■■□□ 2.57
COL13A1-210ENST00000517713 EP400Q96L91 3159 aa31.09■■■□□ 2.57
COL13A1-210ENST00000517713 SLC51AQ86UW1 340 aa31.09■■■□□ 2.57
COL13A1-210ENST00000517713 RBM17Q96I25 401 aaKnown RBP31.09■■■□□ 2.57
COL13A1-210ENST00000517713 SPATA32Q96LK8 384 aa31.09■■■□□ 2.57
COL13A1-210ENST00000517713 RNF41Q9H4P4 317 aaPredicted RBP31.09■■■□□ 2.57
COL13A1-210ENST00000517713 NASPP49321 788 aaPredicted RBP31.08■■■□□ 2.57
COL13A1-210ENST00000517713 DDR1Q08345 913 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 SGMS1Q86VZ5 419 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 LIFRP42702 1097 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 METAP2P50579 478 aaKnown RBP eCLIP31.08■■■□□ 2.57
COL13A1-210ENST00000517713 APOA5Q6Q788 366 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 NFXL1Q6ZNB6 911 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 RBSNQ9H1K0 784 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 SENP2Q9HC62 589 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 ANAPC4Q9UJX5 808 aa31.08■■■□□ 2.57
COL13A1-210ENST00000517713 POLRMTO00411 1230 aaKnown RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 IFIT3O14879 490 aaKnown RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 RRP12Q5JTH9 1297 aaKnown RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 LEO1Q8WVC0 666 aaPredicted RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 TOMM22Q9NS69 142 aa31.07■■■□□ 2.56
COL13A1-210ENST00000517713 ORC3Q9UBD5 711 aaPredicted RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 TMED8Q6PL24 325 aaPredicted RBP31.07■■■□□ 2.56
COL13A1-210ENST00000517713 BRIP1Q9BX63 1249 aa31.07■■■□□ 2.56
COL13A1-210ENST00000517713 MINDY4BA8MYZ0 360 aa31.06■■■□□ 2.56
COL13A1-210ENST00000517713 PRDX5P30044 214 aa31.06■■■□□ 2.56
COL13A1-210ENST00000517713 LETM1O95202 739 aaPredicted RBP31.05■■■□□ 2.56
COL13A1-210ENST00000517713 SPTY2D1Q68D10 685 aaPredicted RBP31.05■■■□□ 2.56
COL13A1-210ENST00000517713 CFAP45Q9UL16 551 aa31.05■■■□□ 2.56
COL13A1-210ENST00000517713 MAST2Q6P0Q8 1798 aa31.05■■■□□ 2.56
COL13A1-210ENST00000517713 ZBTB43O43298 467 aa31.05■■■□□ 2.56
COL13A1-210ENST00000517713 GUCY1B3Q02153 619 aa31.05■■■□□ 2.56
COL13A1-210ENST00000517713 PLSCR1O15162 318 aa31.04■■■□□ 2.56
COL13A1-210ENST00000517713 GPSM2P81274 684 aa31.04■■■□□ 2.56
COL13A1-210ENST00000517713 GIMAP6Q6P9H5 292 aa31.04■■■□□ 2.56
COL13A1-210ENST00000517713 C15orf52Q6ZUT6 534 aaKnown RBP31.04■■■□□ 2.56
COL13A1-210ENST00000517713 STK11IPQ8N1F8 1099 aa31.04■■■□□ 2.56
COL13A1-210ENST00000517713 C8orf76Q96K31 380 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 MTA3Q9BTC8 594 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 JAG2Q9Y219 1238 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 MYH15Q9Y2K3 1946 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 CCDC69A6NI79 296 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 CDKL5O76039 1030 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 ADD1P35611 737 aaKnown RBP31.03■■■□□ 2.56
COL13A1-210ENST00000517713 SART3Q15020 963 aaKnown RBP31.03■■■□□ 2.56
COL13A1-210ENST00000517713 ZNF804AQ7Z570 1209 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 MICU3Q86XE3 530 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 TDRD7Q8NHU6 1098 aaKnown RBP31.03■■■□□ 2.56
COL13A1-210ENST00000517713 CCDC88AQ3V6T2 1871 aa31.03■■■□□ 2.56
COL13A1-210ENST00000517713 BBOX1O75936 387 aa31.02■■■□□ 2.56
COL13A1-210ENST00000517713 HOXA10P31260 410 aaPredicted RBP31.02■■■□□ 2.56
COL13A1-210ENST00000517713 WDR66Q8TBY9 1149 aa31.02■■■□□ 2.56
COL13A1-210ENST00000517713 TSPY26PQ9H489 355 aa31.02■■■□□ 2.56
COL13A1-210ENST00000517713 SLC12A7Q9Y666 1083 aa31.02■■■□□ 2.56
COL13A1-210ENST00000517713 RXRAP19793 462 aa31.02■■■□□ 2.56
COL13A1-210ENST00000517713 CPLX2Q6PUV4 134 aaKnown RBP31.02■■■□□ 2.56
COL13A1-210ENST00000517713 AATFQ9NY61 560 aaKnown RBP eCLIP31.02■■■□□ 2.56
COL13A1-210ENST00000517713 GOLGA6L4A6NEF3 574 aa31.01■■■□□ 2.55
COL13A1-210ENST00000517713 APBA3O96018 575 aa31.01■■■□□ 2.55
COL13A1-210ENST00000517713 ZNF827Q17R98 1081 aa31.01■■■□□ 2.55
COL13A1-210ENST00000517713 GOLGA8AA7E2F4 631 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 IGSF3O75054 1194 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 ATP2B4P23634 1241 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 CDC27P30260 824 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 ATL3Q6DD88 541 aa31■■■□□ 2.55
COL13A1-210ENST00000517713 DZIP1Q86YF9 867 aaKnown RBP31■■■□□ 2.55
COL13A1-210ENST00000517713 CRNKL1Q9BZJ0 848 aaKnown RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms