RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 RAC1P63000 192 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 POU4F3Q15319 338 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 LLGL2Q6P1M3 1020 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 FBXL19Q6PCT2 694 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 BEND7Q8N7W2 519 aaPredicted RBP6.95□□□□□ -1.3
LINC00534-201ENST00000517400 SLC43A3Q8NBI5 491 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 GRIN3AQ8TCU5 1115 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 ZNF296Q8WUU4 475 aaPredicted RBP6.95□□□□□ -1.3
LINC00534-201ENST00000517400 CORO1BQ9BR76 489 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 SPON2Q9BUD6 331 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
LINC00534-201ENST00000517400 FANCD2Q9BXW9 1451 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 DLL1O00548 723 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 GREM1O60565 184 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 TRIM37O94972 964 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 LMNB1P20700 586 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 MAOBP27338 520 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 TRIM28Q13263 835 aaKnown RBP6.94□□□□□ -1.3
LINC00534-201ENST00000517400 GNL2Q13823 731 aaKnown RBP6.94□□□□□ -1.3
LINC00534-201ENST00000517400 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
LINC00534-201ENST00000517400 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
LINC00534-201ENST00000517400 KIAA0825Q8IV33 1275 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 MIR1-1HGQ9H1L0 117 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 SUPT16HQ9Y5B9 1047 aaKnown RBP6.94□□□□□ -1.3
LINC00534-201ENST00000517400 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 PEG3Q9GZU2 1588 aa6.94□□□□□ -1.3
LINC00534-201ENST00000517400 WDR62O43379 1518 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 ADAM11O75078 769 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 GJA8P48165 433 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 TNNI2P48788 182 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 NLRP12P59046 1061 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 PODNQ7Z5L7 613 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 NT5C1AQ9BXI3 368 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 CAPN10Q9HC96 672 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 KRT82Q9NSB4 513 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 KCNK4Q9NYG8 393 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 NOP53Q9NZM5 478 aaKnown RBP6.93□□□□□ -1.3
LINC00534-201ENST00000517400 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 WIZO95785 1651 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 ROBO2Q9HCK4 1378 aa6.93□□□□□ -1.3
LINC00534-201ENST00000517400 DDX3YO15523 660 aaKnown RBP6.92□□□□□ -1.3
LINC00534-201ENST00000517400 ECEL1O95672 775 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 ELNP15502 786 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 RASSF7Q02833 373 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 PAK2Q13177 524 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 SNAP47Q5SQN1 464 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 HP1BP3Q5SSJ5 553 aaPredicted RBP6.92□□□□□ -1.3
LINC00534-201ENST00000517400 MAP1SQ66K74 1059 aaPredicted RBP6.92□□□□□ -1.3
LINC00534-201ENST00000517400 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 GOLM1Q8NBJ4 401 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 RASGRP4Q8TDF6 673 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 GATAD2BQ8WXI9 593 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 KCNB2Q92953 911 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 EAF1Q96JC9 268 aaPredicted RBP6.92□□□□□ -1.3
LINC00534-201ENST00000517400 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
LINC00534-201ENST00000517400 LOC100289279A0A1B0GTE1 492 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 FAM221AA4D161 298 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 CTSBP07858 339 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 HNRNPUQ00839 825 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC00534-201ENST00000517400 MPRIPQ6WCQ1 1025 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 FAM196AQ6ZSG2 479 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 GAL3ST3Q96A11 431 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 GPRASP2Q96D09 838 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 USP26Q9BXU7 913 aa6.91□□□□□ -1.3
LINC00534-201ENST00000517400 CCDC86Q9H6F5 360 aaKnown RBP6.91□□□□□ -1.3
LINC00534-201ENST00000517400 MEGF11A6BM72 1044 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 CILPO75339 1184 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 F13A1P00488 732 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 PTPN11Q06124 597 aaPredicted RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 SEPT6Q14141 434 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 EXOSC6Q5RKV6 272 aaKnown RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 BNC2Q6ZN30 1099 aaPredicted RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 JARID2Q92833 1246 aaPredicted RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 SCARF2Q96GP6 870 aaPredicted RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 GMLQ99445 158 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 LRRC3Q9BY71 257 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.3
LINC00534-201ENST00000517400 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
LINC00534-201ENST00000517400 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 ZNF862O60290 1169 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 DLGAP3O95886 979 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 MPP2Q14168 576 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 KIF4BQ2VIQ3 1234 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 CYB5RLQ6IPT4 315 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 TMEM130Q8N3G9 435 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 TMEM151AQ8N4L1 468 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 GPBAR1Q8TDU6 330 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
LINC00534-201ENST00000517400 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
LINC00534-201ENST00000517400 GDF11O95390 407 aa6.88□□□□□ -1.31
LINC00534-201ENST00000517400 SPATA31C1P0DKV0 1188 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms