RNA–Protein interactions for RNA: ENST00000516307.1

RNU4ATAC4P-201, Transcript of RNA, U4atac small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4ATAC4P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC4P-201ENST00000516307 LRFN2Q9ULH4 789 aa1.2□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CNOT6Q9ULM6 557 aaKnown RBP1.2□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 USP17L3A6NCW0 530 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 USP17L4A6NCW7 530 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MATN3O15232 486 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 LEFTY1O75610 366 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TRPA1O75762 1119 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ESRRAP11474 423 aaPredicted RBP1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 DLG4P78352 724 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 HP1BP3Q5SSJ5 553 aaPredicted RBP1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 USP17L2Q6R6M4 530 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 HHIPL2Q6UWX4 724 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 USP17L1Q7RTZ2 530 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ZDHHC14Q8IZN3 488 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ABHD4Q8TB40 342 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 FEZF2Q8TBJ5 459 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PIK3R5Q8WYR1 880 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 BSNDQ8WZ55 320 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 VTI1AQ96AJ9 217 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 HHIPQ96QV1 700 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 BDH2Q9BUT1 245 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MRIQ9BWK5 157 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 NRSN2Q9GZP1 204 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MCOLN1Q9GZU1 580 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ALG2Q9H553 416 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CARS2Q9HA77 564 aaKnown RBP1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 GDPD2Q9HCC8 539 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 DZANK1Q9NVP4 752 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 KANSL3Q9P2N6 904 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MKRN1Q9UHC7 482 aaKnown RBP1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SALL4Q9UJQ4 1053 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PALD1Q9ULE6 856 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 FNDC3AQ9Y2H6 1198 aaKnown RBP1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 KCTD3Q9Y597 815 aa1.19□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 A6NJR5 290 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 RFXAPO00287 272 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 FOXO3O43524 673 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 EIF4EBP3O60516 100 aaPredicted RBP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SEMA7AO75326 666 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CTSBP07858 339 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TGM1P22735 817 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MAOBP27338 520 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 POU4F3Q15319 338 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CRB2Q5IJ48 1285 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SPACA3Q8IXA5 215 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ETFBKMTQ8IXQ9 262 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TMEM102Q8N9M5 508 aaPredicted RBP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 NXPE3Q969Y0 559 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CCDC120Q96HB5 630 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TEPSINQ96N21 525 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 DUSP23Q9BVJ7 150 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SCAND2PQ9GZW5 306 aaPredicted RBP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ADAM7Q9H2U9 754 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ZFYVE1Q9HBF4 777 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 FAM13BQ9NYF5 915 aa1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.18□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MYOCOSA0A1B0GUC4 107 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ZC3H12DA2A288 527 aaKnown RBP1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PEX10O60683 326 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 AOC2O75106 756 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SLPIP03973 132 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CYP11A1P05108 521 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 RAC2P15153 192 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CES1P23141 567 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 BRD2P25440 801 aaKnown RBP1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 GDF5P43026 501 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 AFF3P51826 1226 aaKnown RBP1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 RTP5Q14D33 572 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ZNF827Q17R98 1081 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 NKPD1Q17RQ9 610 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 COX20Q5RI15 118 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TMEM132EQ6IEE7 984 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 NPAS4Q8IUM7 802 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SP8Q8IXZ3 490 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TOP6BLQ8N6T0 577 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 HEXIM2Q96MH2 286 aaKnown RBP1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ELP3Q9H9T3 547 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PIDD1Q9HB75 910 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 GCM1Q9NP62 436 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TMEM63CQ9P1W3 806 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CNTN3Q9P232 1028 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CNOT11Q9UKZ1 510 aaKnown RBP1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PPP1R9AQ9ULJ8 1098 aa1.17□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SYNGAP1Q96PV0 1343 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TEX51A0A1B0GUA7 166 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 SLC22A31A6NKX4 558 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 K7ESM1 405 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 IGF2BP3O00425 579 aaKnown RBP eCLIP1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CYR61O00622 381 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 TMPRSS2O15393 492 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ATP9BO43861 1147 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ECEL1O95672 775 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 PI3P19957 117 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 WEE1P30291 646 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 MAGEA10P43363 369 aaPredicted RBP1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 RGS19P49795 217 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 CLCN7P51798 805 aa1.16□□□□□ -2.22
RNU4ATAC4P-201ENST00000516307 ERVFC1P60507 584 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms