RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 HMGB1P09429 215 aaKnown RBP10.35□□□□□ -0.75
SFXN1-211ENST00000515736 ANP32AP39687 249 aaKnown RBP10.35□□□□□ -0.75
SFXN1-211ENST00000515736 GNAI1P63096 354 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 CENPCQ03188 943 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 C20orf194Q5TEA3 1177 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 ZKSCAN2Q63HK3 967 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 LIAT1Q6ZQX7 453 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 IFT43Q96FT9 208 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 TGIF2Q9GZN2 237 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 KLK14Q9P0G3 267 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 RRP7AQ9Y3A4 280 aaKnown RBP10.35□□□□□ -0.75
SFXN1-211ENST00000515736 FLT4P35916 1363 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 WNT7AO00755 349 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 GNA15P30679 374 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 PRKAR2BP31323 418 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 SPON1Q9HCB6 807 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 LTN1O94822 1766 aa10.34□□□□□ -0.75
SFXN1-211ENST00000515736 HSP90B1P14625 803 aaKnown RBP10.33□□□□□ -0.76
SFXN1-211ENST00000515736 ZNF76P36508 570 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 FBF1Q8TES7 1133 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 MRGPRX2Q96LB1 330 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 CSRNP1Q96S65 589 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 TINF2Q9BSI4 451 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 PARP3Q9Y6F1 533 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 KAT6BQ8WYB5 2073 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
SFXN1-211ENST00000515736 KDRP35968 1356 aa10.32□□□□□ -0.76
SFXN1-211ENST00000515736 KCNQ2O43526 872 aa10.32□□□□□ -0.76
SFXN1-211ENST00000515736 ARHGAP45Q92619 1136 aa10.32□□□□□ -0.76
SFXN1-211ENST00000515736 EMID1Q96A84 441 aaPredicted RBP10.32□□□□□ -0.76
SFXN1-211ENST00000515736 DDX19BQ9UMR2 479 aa10.32□□□□□ -0.76
SFXN1-211ENST00000515736 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
SFXN1-211ENST00000515736 YY1P25490 414 aa10.31□□□□□ -0.76
SFXN1-211ENST00000515736 PTGIRP43119 386 aa10.31□□□□□ -0.76
SFXN1-211ENST00000515736 CBLBQ13191 982 aa10.31□□□□□ -0.76
SFXN1-211ENST00000515736 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
SFXN1-211ENST00000515736 FTSJ3Q8IY81 847 aaKnown RBP10.31□□□□□ -0.76
SFXN1-211ENST00000515736 KCNH5Q8NCM2 988 aa10.31□□□□□ -0.76
SFXN1-211ENST00000515736 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
SFXN1-211ENST00000515736 ZNF853P0CG23 659 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 PCSK2P16519 638 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 EXOSC9Q06265 439 aaKnown RBP10.3□□□□□ -0.76
SFXN1-211ENST00000515736 ORC1Q13415 861 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 C1orf53Q5VUE5 145 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 ATF7IPQ6VMQ6 1270 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 Q6ZVU0 165 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 TREML1Q86YW5 311 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
SFXN1-211ENST00000515736 SLC43A3Q8NBI5 491 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 FRMD6Q96NE9 622 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
SFXN1-211ENST00000515736 CCSER2Q9H7U1 834 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 AK5Q9Y6K8 562 aa10.3□□□□□ -0.76
SFXN1-211ENST00000515736 N4BP2Q86UW6 1770 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 EIF1AYO14602 144 aaKnown RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 PLSCR1O15162 318 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 NNTQ13423 1086 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 PTF1AQ7RTS3 328 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 ARHGEF25Q86VW2 580 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 MARCH10Q8NA82 808 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 GPR152Q8TDT2 470 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 ANP32EQ9BTT0 268 aa10.29□□□□□ -0.76
SFXN1-211ENST00000515736 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
SFXN1-211ENST00000515736 MEN1O00255 615 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 EXOC5O00471 708 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 HTATSF1O43719 755 aaKnown RBP10.28□□□□□ -0.76
SFXN1-211ENST00000515736 CTSHP09668 335 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 EIF4A2Q14240 407 aaKnown RBP10.28□□□□□ -0.76
SFXN1-211ENST00000515736 CRELD1Q96HD1 420 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 IPO9Q96P70 1041 aaKnown RBP10.28□□□□□ -0.76
SFXN1-211ENST00000515736 CARD10Q9BWT7 1032 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 TANGO6Q9C0B7 1094 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 NHSQ6T4R5 1651 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 NFAT5O94916 1531 aa10.28□□□□□ -0.76
SFXN1-211ENST00000515736 ZBTB7AO95365 584 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 RRS1Q15050 365 aaKnown RBP10.27□□□□□ -0.77
SFXN1-211ENST00000515736 PANK1Q8TE04 598 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 TSR2Q969E8 191 aaKnown RBP10.27□□□□□ -0.77
SFXN1-211ENST00000515736 ACBD3Q9H3P7 528 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 HCSTQ9UBK5 93 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 BCS1LQ9Y276 419 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
SFXN1-211ENST00000515736 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 HMOX1P09601 288 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 TXLNAP40222 546 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
SFXN1-211ENST00000515736 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 C8orf34Q49A92 452 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms