RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	LINS1	Q8NG48	757 aa		13.36	□□□□□ -0.27
CLDND1-231	ENST00000515620	DNAAF4	Q8WXU2	420 aa		13.36	□□□□□ -0.27
CLDND1-231	ENST00000515620	HOOK2	Q96ED9	719 aa		13.36	□□□□□ -0.27
CLDND1-231	ENST00000515620	TMOD2	Q9NZR1	351 aa		13.36	□□□□□ -0.27
CLDND1-231	ENST00000515620	GABRQ	Q9UN88	632 aa		13.36	□□□□□ -0.27
CLDND1-231	ENST00000515620	ELN	P15502	786 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	INPP5B	P32019	993 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	FKBP5	Q13451	457 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	DCAF15	Q66K64	600 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	LMBR1L	Q6UX01	489 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620		Q7L0L9	218 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	MIGA2	Q7L4E1	593 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	TEKT1	Q969V4	418 aa		13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	PARK7	Q99497	189 aa	Known RBP	13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-231	ENST00000515620	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	ADCY3	O60266	1144 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	TFRC	P02786	760 aa	Known RBP	13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	INHA	P05111	366 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	CHAF1A	Q13111	956 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	CCDC57	Q2TAC2	916 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	TWISTNB	Q3B726	338 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	FAM84B	Q96KN1	310 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	DEFB118	Q96PH6	123 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	ZNF341	Q9BYN7	854 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	KCNH4	Q9UQ05	1017 aa		13.34	□□□□□ -0.27
CLDND1-231	ENST00000515620	CYP2C8	P10632	490 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	BCR	P11274	1271 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	MOGS	Q13724	837 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	UBE4A	Q14139	1066 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	EPHA10	Q5JZY3	1008 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	GPR153	Q6NV75	609 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	FAM83A	Q86UY5	434 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	GDF15	Q99988	308 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	STXBP5L	Q9Y2K9	1186 aa		13.33	□□□□□ -0.28
CLDND1-231	ENST00000515620	FLT3LG	P49771	235 aa		13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	HDLBP	Q00341	1268 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	VPS37D	Q86XT2	251 aa		13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	C7orf61	Q8IZ16	206 aa		13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	DIS3L	Q8TF46	1054 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	PAWR	Q96IZ0	340 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	ZDHHC15	Q96MV8	337 aa		13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	ALPK3	Q96L96	1907 aa		13.32	□□□□□ -0.28
CLDND1-231	ENST00000515620	FRAT2	O75474	233 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	BMP8B	P34820	402 aa		13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	FKBP1C	Q5VVH2	108 aa		13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	TBC1D22A	Q8WUA7	517 aa		13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	TAOK2	Q9UL54	1235 aa		13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	MGAM	O43451	1857 aa		13.31	□□□□□ -0.28
CLDND1-231	ENST00000515620	BCAM	P50895	628 aa		13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620	GPAT2	Q6NUI2	795 aa		13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620	PUS3	Q9BZE2	481 aa	Known RBP	13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620	CRISPLD2	Q9H0B8	497 aa		13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620	PAK6	Q9NQU5	681 aa	Predicted RBP	13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620	MTMR10	Q9NXD2	777 aa		13.3	□□□□□ -0.28
CLDND1-231	ENST00000515620		F6X3S4	739 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	TNPO2	O14787	897 aa	Known RBP	13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	SYN1	P17600	705 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	CAPN2	P17655	700 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	C1QBP	Q07021	282 aa	Known RBP	13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	TCP10	Q12799	353 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	NECAB2	Q7Z6G3	386 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	FBXO33	Q7Z6M2	555 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	PXYLP1	Q8TE99	480 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	ZNF112	Q9UJU3	913 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	MAST3	O60307	1309 aa		13.29	□□□□□ -0.28
CLDND1-231	ENST00000515620	MAGEA10	P43363	369 aa	Predicted RBP	13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	IRF5	Q13568	498 aa		13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	LRIT3	Q3SXY7	679 aa		13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	NOL9	Q5SY16	702 aa	Known RBP	13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	BEND3	Q5T5X7	828 aa		13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	TDH	Q8IZJ6	230 aa		13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	UNC80	Q8N2C7	3258 aa		13.28	□□□□□ -0.28
CLDND1-231	ENST00000515620	GRM8	O00222	908 aa		13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	CAVIN4	Q5BKX8	364 aa		13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	GADL1	Q6ZQY3	521 aa		13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	FAM151A	Q8WW52	585 aa		13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620	MROH5	Q6ZUA9	1318 aa		13.27	□□□□□ -0.29
CLDND1-231	ENST00000515620		A0A0G2JLL6	359 aa	Predicted RBP	13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	CXCL11	O14625	94 aa		13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	DDX10	Q13206	875 aa	Known RBP	13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	HHIPL2	Q6UWX4	724 aa		13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	MRI	Q9BWK5	157 aa		13.26	□□□□□ -0.29
CLDND1-231	ENST00000515620	NFIA	Q12857	509 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	METTL24	Q5JXM2	366 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	FASTKD5	Q7L8L6	764 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	ANKLE1	Q8NAG6	615 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	COA7	Q96BR5	231 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	UBE2O	Q9C0C9	1292 aa	Known RBP	13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	PICK1	Q9NRD5	415 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	SUGT1	Q9Y2Z0	365 aa		13.25	□□□□□ -0.29
CLDND1-231	ENST00000515620	ZHX2	Q9Y6X8	837 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms