RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 PDE8AO60658 829 aa17.33■□□□□ 0.36
SMAD1-216ENST00000515527 MOGSQ13724 837 aa17.33■□□□□ 0.36
SMAD1-216ENST00000515527 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
SMAD1-216ENST00000515527 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
SMAD1-216ENST00000515527 CD209Q9NNX6 404 aa17.33■□□□□ 0.36
SMAD1-216ENST00000515527 BSDC1Q9NW68 430 aaPredicted RBP17.33■□□□□ 0.36
SMAD1-216ENST00000515527 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
SMAD1-216ENST00000515527 BMP1P13497 986 aa17.31■□□□□ 0.36
SMAD1-216ENST00000515527 DNAJB2P25686 324 aa17.31■□□□□ 0.36
SMAD1-216ENST00000515527 GPAT2Q6NUI2 795 aa17.31■□□□□ 0.36
SMAD1-216ENST00000515527 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
SMAD1-216ENST00000515527 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
SMAD1-216ENST00000515527 ATN1P54259 1190 aaPredicted RBP17.3■□□□□ 0.36
SMAD1-216ENST00000515527 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
SMAD1-216ENST00000515527 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
SMAD1-216ENST00000515527 RNPC3Q96LT9 517 aaKnown RBP17.3■□□□□ 0.36
SMAD1-216ENST00000515527 TSPYL2Q9H2G4 693 aaPredicted RBP17.3■□□□□ 0.36
SMAD1-216ENST00000515527 C11orf16Q9NQ32 467 aa17.3■□□□□ 0.36
SMAD1-216ENST00000515527 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
SMAD1-216ENST00000515527 AK9Q5TCS8 1911 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 KCNJ4P48050 445 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 NHLH1Q02575 133 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
SMAD1-216ENST00000515527 BADQ92934 168 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
SMAD1-216ENST00000515527 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
SMAD1-216ENST00000515527 INPP5BP32019 993 aa17.28■□□□□ 0.36
SMAD1-216ENST00000515527 DCAF15Q66K64 600 aa17.28■□□□□ 0.36
SMAD1-216ENST00000515527 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
SMAD1-216ENST00000515527 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
SMAD1-216ENST00000515527 PRDM12Q9H4Q4 367 aa17.28■□□□□ 0.36
SMAD1-216ENST00000515527 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
SMAD1-216ENST00000515527 IGFBP4P22692 258 aa17.27■□□□□ 0.36
SMAD1-216ENST00000515527 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
SMAD1-216ENST00000515527 FOXK2Q01167 660 aa17.27■□□□□ 0.36
SMAD1-216ENST00000515527 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.36
SMAD1-216ENST00000515527 CXXC1Q9P0U4 656 aaPredicted RBP17.27■□□□□ 0.36
SMAD1-216ENST00000515527 XIRP2A4UGR9 3374 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 RTP1P59025 263 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 ANKRD13CQ8N6S4 541 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 TRIB2Q92519 343 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 ATP11BQ9Y2G3 1177 aa17.26■□□□□ 0.35
SMAD1-216ENST00000515527 KCNQ1P51787 676 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 TFF2Q03403 129 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
SMAD1-216ENST00000515527 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
SMAD1-216ENST00000515527 CACNB3P54284 484 aa17.24■□□□□ 0.35
SMAD1-216ENST00000515527 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
SMAD1-216ENST00000515527 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
SMAD1-216ENST00000515527 FASTKD5Q7L8L6 764 aaKnown RBP17.24■□□□□ 0.35
SMAD1-216ENST00000515527 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
SMAD1-216ENST00000515527 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.23■□□□□ 0.35
SMAD1-216ENST00000515527 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.23■□□□□ 0.35
SMAD1-216ENST00000515527 CXCL11O14625 94 aa17.23■□□□□ 0.35
SMAD1-216ENST00000515527 NEFMP07197 916 aa17.23■□□□□ 0.35
SMAD1-216ENST00000515527 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
SMAD1-216ENST00000515527 REV3LO60673 3130 aa17.22■□□□□ 0.35
SMAD1-216ENST00000515527 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
SMAD1-216ENST00000515527 CTSWP56202 376 aa17.22■□□□□ 0.35
SMAD1-216ENST00000515527 LHX8Q68G74 356 aa17.22■□□□□ 0.35
SMAD1-216ENST00000515527 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
SMAD1-216ENST00000515527 WDFY4Q6ZS81 3184 aa17.22■□□□□ 0.35
SMAD1-216ENST00000515527 CYP2B6P20813 491 aa17.21■□□□□ 0.35
SMAD1-216ENST00000515527 FAM110CQ1W6H9 321 aa17.21■□□□□ 0.35
SMAD1-216ENST00000515527 ZNF804AQ7Z570 1209 aa17.21■□□□□ 0.35
SMAD1-216ENST00000515527 KHSRPQ92945 711 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMAD1-216ENST00000515527 GREM2Q9H772 168 aa17.21■□□□□ 0.35
SMAD1-216ENST00000515527 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
SMAD1-216ENST00000515527 MYH3P11055 1940 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 FRMPD3Q5JV73 1810 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 IL1R1P14778 569 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
SMAD1-216ENST00000515527 CRKP46108 304 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 ADGRE1Q14246 886 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
SMAD1-216ENST00000515527 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
SMAD1-216ENST00000515527 CACNB2Q08289 660 aaPredicted RBP17.19■□□□□ 0.34
SMAD1-216ENST00000515527 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
SMAD1-216ENST00000515527 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
SMAD1-216ENST00000515527 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
SMAD1-216ENST00000515527 SNAP23O00161 211 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 SKIV2LQ15477 1246 aaKnown RBP17.18■□□□□ 0.34
SMAD1-216ENST00000515527 MFSD14BQ5SR56 506 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
SMAD1-216ENST00000515527 CCDC191Q8NCU4 936 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 TTLL11Q8NHH1 800 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 FBXL18Q96ME1 805 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 MYD88Q99836 296 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 PLXNB2O15031 1838 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 PLXNA1Q9UIW2 1896 aa17.18■□□□□ 0.34
SMAD1-216ENST00000515527 ST18O60284 1047 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms