RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
TCOF1-215ENST00000515516 CFHR5Q9BXR6 569 aa16.87■□□□□ 0.29
TCOF1-215ENST00000515516 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
TCOF1-215ENST00000515516 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
TCOF1-215ENST00000515516 RASGRF1Q13972 1273 aa16.86■□□□□ 0.29
TCOF1-215ENST00000515516 VGLL4Q14135 290 aa16.86■□□□□ 0.29
TCOF1-215ENST00000515516 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
TCOF1-215ENST00000515516 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
TCOF1-215ENST00000515516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.86■□□□□ 0.293e-8■□□□□ 10.1
TCOF1-215ENST00000515516 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
TCOF1-215ENST00000515516 GJA5P36382 358 aa16.85■□□□□ 0.29
TCOF1-215ENST00000515516 GTF2A2P52657 109 aa16.85■□□□□ 0.29
TCOF1-215ENST00000515516 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
TCOF1-215ENST00000515516 TCP10Q12799 353 aa16.85■□□□□ 0.29
TCOF1-215ENST00000515516 ZNF341Q9BYN7 854 aa16.85■□□□□ 0.29
TCOF1-215ENST00000515516 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
TCOF1-215ENST00000515516 IGF2BP3O00425 579 aaKnown RBP eCLIP16.84■□□□□ 0.29
TCOF1-215ENST00000515516 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
TCOF1-215ENST00000515516 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
TCOF1-215ENST00000515516 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
TCOF1-215ENST00000515516 TESPA1A2RU30 521 aaPredicted RBP16.83■□□□□ 0.28
TCOF1-215ENST00000515516 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
TCOF1-215ENST00000515516 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
TCOF1-215ENST00000515516 UQCRFS1P1P0C7P4 283 aa16.83■□□□□ 0.28
TCOF1-215ENST00000515516 MS4A1P11836 297 aa16.83■□□□□ 0.28
TCOF1-215ENST00000515516 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.28
TCOF1-215ENST00000515516 MIGA2Q7L4E1 593 aa16.83■□□□□ 0.28
TCOF1-215ENST00000515516 RPAP1Q9BWH6 1393 aaPredicted RBP16.83■□□□□ 0.28
TCOF1-215ENST00000515516 CASP8AP2Q9UKL3 1982 aa16.83■□□□□ 0.28
TCOF1-215ENST00000515516 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 CCL15-CCL14A0A0B4J2E2 113 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-215ENST00000515516 GSTO1P78417 241 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 POLA2Q14181 598 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 CCL15Q16663 113 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 ERO1BQ86YB8 467 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 SPATA5Q8NB90 893 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 ZKSCAN4Q969J2 545 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-215ENST00000515516 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
TCOF1-215ENST00000515516 SPDYE5A6NIY4 337 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 LDHCP07864 332 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 NFIAQ12857 509 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
TCOF1-215ENST00000515516 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 FAM163AQ96GL9 167 aaPredicted RBP16.81■□□□□ 0.28
TCOF1-215ENST00000515516 MS4A4AQ96JQ5 239 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
TCOF1-215ENST00000515516 GAKO14976 1311 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 ENTPD3O75355 529 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 CETPP11597 493 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 RLBP1P12271 317 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 BTDP43251 543 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 MLLT1Q03111 559 aaPredicted RBP16.8■□□□□ 0.28
TCOF1-215ENST00000515516 MECOMQ03112 1051 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 CRHR2Q13324 411 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 SNAPC2Q13487 334 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 ERO1AQ96HE7 468 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 PTPN18Q99952 460 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 IDI2Q9BXS1 227 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 ZFYVE28Q9HCC9 887 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 LRP2BPQ9P2M1 347 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 HPS5Q9UPZ3 1129 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
TCOF1-215ENST00000515516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
TCOF1-215ENST00000515516 MROH7-TTC4A0A0A0MT08 1334 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-215ENST00000515516 RGS3P49796 1198 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 PPIL2Q13356 520 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-215ENST00000515516 BRI3BPQ8WY22 251 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
TCOF1-215ENST00000515516 RGS19P49795 217 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 PPATQ06203 517 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 PICALMQ13492 652 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
TCOF1-215ENST00000515516 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 PANK1Q8TE04 598 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
TCOF1-215ENST00000515516 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
TCOF1-215ENST00000515516 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 IRF6O14896 467 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
TCOF1-215ENST00000515516 INPP5BP32019 993 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 MCAMP43121 646 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 SP3Q02447 781 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 ZNF112Q9UJU3 913 aa16.77■□□□□ 0.28
TCOF1-215ENST00000515516 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
TCOF1-215ENST00000515516 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
TCOF1-215ENST00000515516 NSUN4Q96CB9 384 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms