RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 IRAK1P51617 712 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 VSNL1P62760 191 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 PPFIA1Q13136 1202 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 TRIM74Q86UV6 250 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 TRIM73Q86UV7 250 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 PGBD1Q96JS3 809 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 RHOXF2Q9BQY4 288 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 CAPS2Q9BXY5 557 aa8.18□□□□□ -1.1
LDB2-216ENST00000515064 GOLGA6CA6NDK9 693 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 ELL2O00472 640 aaPredicted RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 EIF3HO15372 352 aaKnown RBP eCLIP8.17□□□□□ -1.1
LDB2-216ENST00000515064 GOLGA6DP0CG33 693 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 SMTNP53814 917 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 CCDC40Q4G0X9 1142 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 CRACR2AQ9BSW2 395 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 RABEP2Q9H5N1 569 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 HOMER3Q9NSC5 361 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 GOLGA6AQ9NYA3 693 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 SAMM50Q9Y512 469 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 CDC42BPGQ6DT37 1551 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 A0A087WWV3 80 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 NDUFAB1O14561 156 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 MEFVO15553 781 aaPredicted RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 SYF2O95926 243 aaKnown RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 SLC8A1P32418 973 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 GNGT1P63211 74 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 PLCB4Q15147 1175 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 SLC5A9Q2M3M2 681 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 FAM182BQ5T319 152 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 NFXL1Q6ZNB6 911 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 DRAXINQ8NBI3 349 aaPredicted RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 BATF3Q9NR55 127 aa8.17□□□□□ -1.1
LDB2-216ENST00000515064 CHCHD3Q9NX63 227 aaKnown RBP8.17□□□□□ -1.1
LDB2-216ENST00000515064 CEP350Q5VT06 3117 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 GOLGA6L7A0A1B0GV03 622 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 ENO4A6NNW6 628 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 CBFA2T2O43439 604 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 CPA1P15085 419 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 TUBB2AQ13885 445 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
LDB2-216ENST00000515064 KRT28Q7Z3Y7 464 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 CCAR1Q8IX12 1150 aaKnown RBP8.16□□□□□ -1.1
LDB2-216ENST00000515064 KIRREL3Q8IZU9 778 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 TSPYL6Q8N831 410 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 NECAB1Q8N987 351 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 TUBB2BQ9BVA1 445 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 CDC23Q9UJX2 597 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 CFAP45Q9UL16 551 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 SPATA31A3Q5VYP0 1347 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 COL22A1Q8NFW1 1626 aaPredicted RBP8.16□□□□□ -1.1
LDB2-216ENST00000515064 KNDC1Q76NI1 1749 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 IFT172Q9UG01 1749 aa8.16□□□□□ -1.1
LDB2-216ENST00000515064 PPFIA2O75334 1257 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 MCM3P25205 808 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 RAB27AP51159 221 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 STIM1Q13586 685 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 TWISTNBQ3B726 338 aaPredicted RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 FILIP1LQ4L180 1135 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 SPDYE1Q8NFV5 336 aaPredicted RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 VCPKMTQ9H867 229 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 CYP46A1Q9Y6A2 500 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 BRWD3Q6RI45 1802 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 CTAGE15A4D2H0 777 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 GIGYF1O75420 1035 aaPredicted RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 CTAGE8P0CG41 777 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 SNX1Q13596 522 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 C1QTNF12Q5T7M4 302 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 ARMC3Q5W041 872 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 CTAGE6Q86UF2 777 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 CTAGE4Q8IX94 777 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 C3orf20Q8ND61 904 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 MAGEC3Q8TD91 643 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 LMBR1Q8WVP7 490 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.1
LDB2-216ENST00000515064 BPIFA3Q9BQP9 254 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 HPCAL4Q9UM19 191 aa8.15□□□□□ -1.1
LDB2-216ENST00000515064 GLI3P10071 1580 aa8.15□□□□□ -1.11
LDB2-216ENST00000515064 MARF1Q9Y4F3 1742 aaKnown RBP8.14□□□□□ -1.11
LDB2-216ENST00000515064 TECPR2O15040 1411 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 A0A0G2JS52 829 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 PPP1R12BO60237 982 aaPredicted RBP8.14□□□□□ -1.11
LDB2-216ENST00000515064 RASSF9O75901 435 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 SERPINC1P01008 464 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 FANCCQ00597 558 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 DCTN1Q14203 1278 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 E2F5Q15329 346 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 ME3Q16798 604 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 TBC1D25Q3MII6 688 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 CDCA2Q69YH5 1023 aaPredicted RBP8.14□□□□□ -1.11
LDB2-216ENST00000515064 TLDC1Q6P9B6 456 aa8.14□□□□□ -1.11
LDB2-216ENST00000515064 YTHDF3Q7Z739 585 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms