RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DDX60LQ5H9U9 1706 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 A0A0D9SFI3 127 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 F8W031 263 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 H7C1D1 291 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 SGSM2O43147 1006 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 MFAP1P55081 439 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 APOBEC3HQ6NTF7 200 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 RRAGCQ9HB90 399 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 MYOZ2Q9NPC6 264 aa14.41□□□□□ -0.1
PDLIM5-220ENST00000514830 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 IQCA1LA6NCM1 817 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 CHGBP05060 677 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 GNAT2P19087 354 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 LMOD1P29536 600 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 RHBDL3P58872 404 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 CFAP100Q494V2 611 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 CWC27Q6UX04 472 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 TNS4Q8IZW8 715 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 JMYQ8N9B5 988 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 NOL10Q9BSC4 688 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 ESYT1Q9BSJ8 1104 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 NAV1Q8NEY1 1877 aa14.4□□□□□ -0.1
PDLIM5-220ENST00000514830 LAMA4Q16363 1823 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 M0R2C6 588 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 BTDP43251 543 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 DLGAP5Q15398 846 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 STRBPQ96SI9 672 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 HACL1Q9UJ83 578 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 MYH1P12882 1939 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 CCDC171Q6TFL3 1326 aa14.39□□□□□ -0.11
PDLIM5-220ENST00000514830 COL2A1P02458 1487 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 LAMB1P07942 1786 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 POTECB2RU33 542 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 WNT10BO00744 389 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 GPAA1O43292 621 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 MBD4O95243 580 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 VEGFAP15692 232 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 EPS15P42566 896 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 GIMAP6Q6P9H5 292 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 USP50Q70EL3 339 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 PRMT6Q96LA8 375 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 SEC62Q99442 399 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 IDI2Q9BXS1 227 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 AATFQ9NY61 560 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
PDLIM5-220ENST00000514830 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 POLR2AP24928 1970 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 LCORLQ8N3X6 602 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 IL25Q9H293 177 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 PGAP2Q9UHJ9 254 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 PITPNM2Q9BZ72 1349 aa14.37□□□□□ -0.11
PDLIM5-220ENST00000514830 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 MYO1BO43795 1136 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 ALX1Q15699 326 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 PNMA8AQ86V59 439 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 ZC3H15Q8WU90 426 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 DSCC1Q9BVC3 393 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 MKRN1Q9UHC7 482 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-220ENST00000514830 FOXP2O15409 715 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 CAPN15O75808 1086 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 REC8O95072 547 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 EGFRP00533 1210 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 EPHX2P34913 555 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 SAMD7Q7Z3H4 446 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 SH3RF3Q8TEJ3 882 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 USP40Q9NVE5 1235 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 PCDHAC2Q9Y5I4 1007 aa14.35□□□□□ -0.11
PDLIM5-220ENST00000514830 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 ENTPD3O75355 529 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 HIRAP54198 1017 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 NBPF9Q3BBW0 867 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 TBC1D10BQ4KMP7 808 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms