RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 JARID2Q92833 1246 aaPredicted RBP7.54□□□□□ -1.2
RFC1-216ENST00000514572 FERD3LQ96RJ6 166 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 EMILIN2Q9BXX0 1053 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
RFC1-216ENST00000514572 IGFLR1Q9H665 355 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 SOX17Q9H6I2 414 aaPredicted RBP7.54□□□□□ -1.2
RFC1-216ENST00000514572 ACTR10Q9NZ32 417 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 MEIS3P2A8K0S8 358 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 BMP4P12644 408 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 LMNB1P20700 586 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 FOXR1Q6PIV2 292 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
RFC1-216ENST00000514572 SOX1O00570 391 aaPredicted RBP7.52□□□□□ -1.21
RFC1-216ENST00000514572 WIPF1O43516 503 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 ADH6P28332 368 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 TBC1D8BQ0IIM8 1120 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 AP3B2Q13367 1082 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 IKBKEQ14164 716 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 GRIK5Q16478 980 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
RFC1-216ENST00000514572 GK5Q6ZS86 529 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 CACTIN-AS1Q8N1I8 211 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 LILRB2Q8N423 598 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 BRINP2Q9C0B6 783 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 LACRTQ9GZZ8 138 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 SH2B1Q9NRF2 756 aaPredicted RBP7.52□□□□□ -1.21
RFC1-216ENST00000514572 NXF1Q9UBU9 619 aaKnown RBP7.52□□□□□ -1.21
RFC1-216ENST00000514572 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.21
RFC1-216ENST00000514572 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
RFC1-216ENST00000514572 H3BRJ5 948 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 BPNT1O95861 308 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 GSTP1P09211 210 aaKnown RBP7.51□□□□□ -1.21
RFC1-216ENST00000514572 MCM4P33991 863 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 SH3TC2Q8TF17 1288 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 KCNB2Q92953 911 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 PCDHB14Q9Y5E9 798 aa7.51□□□□□ -1.21
RFC1-216ENST00000514572 CDC14CA4D256 554 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 GFRA2O00451 464 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 TM4SF5O14894 197 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 PDPK1O15530 556 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 CDC27P30260 824 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 BAG6P46379 1132 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 MICALL1Q8N3F8 863 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 CRBNQ96SW2 442 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
RFC1-216ENST00000514572 MX2P20592 715 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 CDK8P49336 464 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 PTPROQ16827 1216 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 PSAPL1Q6NUJ1 521 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 KIAA0907Q7Z7F0 614 aaPredicted RBP7.49□□□□□ -1.21
RFC1-216ENST00000514572 TAB3Q8N5C8 712 aaPredicted RBP7.49□□□□□ -1.21
RFC1-216ENST00000514572 SLC16A10Q8TF71 515 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 TMEM260Q9NX78 707 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 STARD13Q9Y3M8 1113 aa7.49□□□□□ -1.21
RFC1-216ENST00000514572 ELOA3CA0A087WX78 387 aaPredicted RBP7.48□□□□□ -1.21
RFC1-216ENST00000514572 ELOA3DA6NLF2 546 aaPredicted RBP7.48□□□□□ -1.21
RFC1-216ENST00000514572 UPK3BL1B0FP48 263 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 UPK3BL2E5RIL1 263 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 FXNQ16595 210 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 ELOA3BQ3SY89 546 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 FBXW10Q5XX13 1052 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 MAP1SQ66K74 1059 aaPredicted RBP7.48□□□□□ -1.21
RFC1-216ENST00000514572 C20orf204Q6ZNR8 217 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 ELOA3Q8NG57 546 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 DDX54Q8TDD1 881 aaKnown RBP7.48□□□□□ -1.21
RFC1-216ENST00000514572 WNT8BQ93098 351 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 ANTXR1Q9H6X2 564 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 KRT82Q9NSB4 513 aa7.48□□□□□ -1.21
RFC1-216ENST00000514572 A0A1W2PQH9 124 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 CCDC85CA6NKD9 419 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 H3BM21 787 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 GRIN3BO60391 1043 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 CDC45O75419 566 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 HTR3BO95264 441 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 GJB6O95452 261 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 CABP4P57796 275 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 PIP4K2BP78356 416 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 SQSTM1Q13501 440 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 DIEXFQ68CQ4 756 aaKnown RBP7.47□□□□□ -1.21
RFC1-216ENST00000514572 RUFY4Q6ZNE9 571 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 NPAS3Q8IXF0 933 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 TMEM40Q8WWA1 233 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 ST7Q9NRC1 585 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 TACC3Q9Y6A5 838 aa7.47□□□□□ -1.21
RFC1-216ENST00000514572 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.22
RFC1-216ENST00000514572 CLSTN1O94985 981 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms