RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GOLIM4O00461 696 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 NF2P35240 595 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 TNNI2P48788 182 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 DEFB115Q30KQ5 88 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 OTUD7AQ8TE49 926 aaPredicted RBP16.98■□□□□ 0.31
USP46-209ENST00000514536 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
USP46-209ENST00000514536 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
USP46-209ENST00000514536 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
USP46-209ENST00000514536 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
USP46-209ENST00000514536 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 HAUS7Q99871 368 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
USP46-209ENST00000514536 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 PRKG1Q13976 671 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
USP46-209ENST00000514536 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 MOB2Q70IA6 237 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 TMEM39BQ9GZU3 492 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
USP46-209ENST00000514536 IGSF3O75054 1194 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 CYP7A1P22680 504 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 HUNKP57058 714 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 TCP10Q12799 353 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 NFIAQ12857 509 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
USP46-209ENST00000514536 SUPT20HL1Q3ZLR7 823 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 FAM83AQ86UY5 434 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 TEPSINQ96N21 525 aa16.96■□□□□ 0.31
USP46-209ENST00000514536 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 PAXIP1Q6ZW49 1069 aaPredicted RBP16.95■□□□□ 0.3
USP46-209ENST00000514536 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
USP46-209ENST00000514536 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 FZD1Q9UP38 647 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
USP46-209ENST00000514536 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 RHBDL3P58872 404 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP46-209ENST00000514536 TRPM7Q96QT4 1865 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 BAG3O95817 575 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
USP46-209ENST00000514536 MX1P20591 662 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 VEGFBP49765 207 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 FKBP1BP68106 108 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 SLC9C2Q5TAH2 1124 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 FAM151AQ8WW52 585 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
USP46-209ENST00000514536 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
USP46-209ENST00000514536 RGS3P49796 1198 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 PPP4CP60510 307 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 NUCB1Q02818 461 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 GRM1Q13255 1194 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 CHD1LQ86WJ1 897 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
USP46-209ENST00000514536 HHIPL1Q96JK4 782 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
USP46-209ENST00000514536 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
USP46-209ENST00000514536 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 ERC2O15083 957 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
USP46-209ENST00000514536 PDE6AP16499 860 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
USP46-209ENST00000514536 PICALMQ13492 652 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 DDX4Q9NQI0 724 aaKnown RBP16.92■□□□□ 0.3
USP46-209ENST00000514536 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
USP46-209ENST00000514536 ENTPD3O75355 529 aa16.91■□□□□ 0.3
USP46-209ENST00000514536 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
USP46-209ENST00000514536 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
USP46-209ENST00000514536 PLCG2P16885 1265 aa16.91■□□□□ 0.3
USP46-209ENST00000514536 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
USP46-209ENST00000514536 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
USP46-209ENST00000514536 ZNF532Q9HCE3 1301 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 USP2O75604 605 aaPredicted RBP16.9■□□□□ 0.3
USP46-209ENST00000514536 ECE1P42892 770 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
USP46-209ENST00000514536 PDE1AP54750 535 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
USP46-209ENST00000514536 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
USP46-209ENST00000514536 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP46-209ENST00000514536 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
USP46-209ENST00000514536 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.3
USP46-209ENST00000514536 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms