RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 HAND2P61296 217 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 PLEKHA4Q9H4M7 779 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 LZTFL1Q9NQ48 299 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 MYO1CO00159 1063 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 PFKFB2O60825 505 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
VCAN-210ENST00000513960 E7EWF7 191 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 FAM193AP78312 1265 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 C8orf76Q96K31 380 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 PCDHA7Q9UN72 937 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 MAST3O60307 1309 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 TPM1P09493 284 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 RHOXF2BP0C7M4 288 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 RHOXF2Q9BQY4 288 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 ISCA1Q9BUE6 129 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
VCAN-210ENST00000513960 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 XAGE2Q96GT9 111 aa11.08□□□□□ -0.64
VCAN-210ENST00000513960 CBFA2T2O43439 604 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
VCAN-210ENST00000513960 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
VCAN-210ENST00000513960 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 COL5A2P05997 1499 aaPredicted RBP11.07□□□□□ -0.64
VCAN-210ENST00000513960 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
VCAN-210ENST00000513960 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
VCAN-210ENST00000513960 GJB4Q9NTQ9 266 aa11.07□□□□□ -0.64
VCAN-210ENST00000513960 SPTLC2O15270 562 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 PCCAP05165 728 aaPredicted RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 ADKP55263 362 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 RABEP2Q9H5N1 569 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 LCMT1Q9UIC8 334 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 GPTP24298 496 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 SMARCC2Q8TAQ2 1214 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 ASAP1Q9ULH1 1129 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 RRP15Q9Y3B9 282 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 CLIC4Q9Y696 253 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 LAMB4A4D0S4 1761 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 ADORA1P30542 326 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 TRIM28Q13263 835 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 NAA16Q6N069 864 aaPredicted RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 LDHAL6AQ6ZMR3 332 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 GOLGA1Q92805 767 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
VCAN-210ENST00000513960 PDE11AQ9HCR9 933 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
VCAN-210ENST00000513960 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 M0R2C6 588 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 ZNF202O95125 648 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 EXOSC10Q01780 885 aaKnown RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 WWC2Q6AWC2 1192 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 KLHL10Q6JEL2 608 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 RBM43Q6ZSC3 357 aaKnown RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 ZBTB38Q8NAP3 1195 aaPredicted RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.05□□□□□ -0.64
VCAN-210ENST00000513960 PARP4Q9UKK3 1724 aaKnown RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 SYKP43405 635 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 CC2D1AQ6P1N0 951 aaPredicted RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 NBPF11Q86T75 865 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 ZNF274Q96GC6 653 aaPredicted RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 RCOR1Q9UKL0 485 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 EFCAB8A8MWE9 144 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
VCAN-210ENST00000513960 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 DPF2Q92785 391 aa11.05□□□□□ -0.64
VCAN-210ENST00000513960 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 IBSPP21815 317 aaPredicted RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 PDIA3P30101 505 aaKnown RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 SPECC1Q5M775 1068 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 PIGBQ92521 554 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 BAG1Q99933 345 aaPredicted RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 ADAM21Q9UKJ8 722 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 GOLGA8BA8MQT2 603 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 ERLIN1O75477 346 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 SASH3O75995 380 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 ZAP70P43403 619 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
VCAN-210ENST00000513960 APPBP2Q92624 585 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 L2HGDHQ9H9P8 463 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 TADA3O75528 432 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 PNOCQ13519 176 aa11.04□□□□□ -0.64
VCAN-210ENST00000513960 LONRF2Q1L5Z9 754 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms