RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
HTT-213ENST00000513806 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
HTT-213ENST00000513806 M0R2C6 588 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 HHIPL2Q6UWX4 724 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 USP50Q70EL3 339 aaPredicted RBP13.71□□□□□ -0.21
HTT-213ENST00000513806 CNTROBQ8N137 903 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 MTMR14Q8NCE2 650 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
HTT-213ENST00000513806 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 ZDHHC15Q96MV8 337 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 USP40Q9NVE5 1235 aa13.71□□□□□ -0.21
HTT-213ENST00000513806 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
HTT-213ENST00000513806 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 RNF113AO15541 343 aaKnown RBP13.7□□□□□ -0.22
HTT-213ENST00000513806 GSTO1P78417 241 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
HTT-213ENST00000513806 NFIAQ12857 509 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 CDAN1Q8IWY9 1227 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.7□□□□□ -0.22
HTT-213ENST00000513806 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
HTT-213ENST00000513806 ARMT1Q9H993 441 aa13.7□□□□□ -0.22
HTT-213ENST00000513806 GPR75-ASB3A0A0A6YYF3 556 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 A0A0D9SFI3 127 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 MBD4O95243 580 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 RHBDL3P58872 404 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
HTT-213ENST00000513806 PICALMQ13492 652 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
HTT-213ENST00000513806 GLIS2Q9BZE0 524 aaPredicted RBP13.69□□□□□ -0.22
HTT-213ENST00000513806 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 TRAF5O00463 557 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 PRKAB2O43741 272 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 LDHCP07864 332 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 TCP10Q12799 353 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
HTT-213ENST00000513806 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
HTT-213ENST00000513806 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
HTT-213ENST00000513806 MRIQ9BWK5 157 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 IL25Q9H293 177 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 DDX4Q9NQI0 724 aaKnown RBP13.68□□□□□ -0.22
HTT-213ENST00000513806 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
HTT-213ENST00000513806 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
HTT-213ENST00000513806 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 LDHDQ86WU2 507 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 TEX11Q8IYF3 940 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
HTT-213ENST00000513806 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
HTT-213ENST00000513806 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
HTT-213ENST00000513806 MYO1BO43795 1136 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 EVX2Q03828 476 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 ZMYM1Q5SVZ6 1142 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
HTT-213ENST00000513806 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
HTT-213ENST00000513806 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 APPBP2Q92624 585 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
HTT-213ENST00000513806 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 PGAP2Q9UHJ9 254 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 FZD1Q9UP38 647 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
HTT-213ENST00000513806 SMIM22K7EJ46 135 aa13.65□□□□□ -0.22
HTT-213ENST00000513806 GPAA1O43292 621 aa13.65□□□□□ -0.22
HTT-213ENST00000513806 PPP4CP60510 307 aa13.65□□□□□ -0.22
HTT-213ENST00000513806 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
HTT-213ENST00000513806 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
HTT-213ENST00000513806 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
HTT-213ENST00000513806 MYH8P13535 1937 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 LAMB1P07942 1786 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 BAG3O95817 575 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
HTT-213ENST00000513806 CHMLP26374 656 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 MMP14P50281 582 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 RASA3Q14644 834 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
HTT-213ENST00000513806 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 ZNF408Q9H9D4 720 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 DIAPH3Q9NSV4 1193 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 TMOD2Q9NZR1 351 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 FLT1P17948 1338 aa13.64□□□□□ -0.23
HTT-213ENST00000513806 TOMM70O94826 608 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 CYP2D6P10635 497 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms