RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
GYPB-215ENST00000513677 TCERG1O14776 1098 aaKnown RBP7.73□□□□□ -1.17
GYPB-215ENST00000513677 SPINT1O43278 529 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 NPR1P16066 1061 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 PTGIRP43119 386 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 USP4Q13107 963 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 DEFB115Q30KQ5 88 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 TBC1D9Q6ZT07 1266 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 CYP2U1Q7Z449 544 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 CCER1Q8TC90 406 aaPredicted RBP7.73□□□□□ -1.17
GYPB-215ENST00000513677 PRDM10Q9NQV6 1147 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 NIP7Q9Y221 180 aaKnown RBP eCLIP7.73□□□□□ -1.17
GYPB-215ENST00000513677 ZNF652Q9Y2D9 606 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 KIF7Q2M1P5 1343 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 PASKQ96RG2 1323 aa7.73□□□□□ -1.17
GYPB-215ENST00000513677 CCDC85CA6NKD9 419 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 USP17L5A8MUK1 530 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 PRKAR2BP31323 418 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 IARSP41252 1262 aaKnown RBP7.72□□□□□ -1.17
GYPB-215ENST00000513677 FMR1Q06787 632 aaKnown RBP eCLIP7.72□□□□□ -1.17
GYPB-215ENST00000513677 MCM10Q7L590 875 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 CNTROBQ8N137 903 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
GYPB-215ENST00000513677 INSM2Q96T92 566 aaPredicted RBP7.72□□□□□ -1.17
GYPB-215ENST00000513677 SOBPA7XYQ1 873 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 HSPA8P11142 646 aaKnown RBP7.71□□□□□ -1.18
GYPB-215ENST00000513677 LMOD1P29536 600 aaPredicted RBP7.71□□□□□ -1.18
GYPB-215ENST00000513677 NCOA4Q13772 614 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 DCTN1Q14203 1278 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 EML3Q32P44 896 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 TPTE2Q6XPS3 522 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 RTKN2Q8IZC4 609 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 C7orf43Q8WVR3 580 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 JDP2Q8WYK2 163 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 RTF1Q92541 710 aaKnown RBP7.71□□□□□ -1.18
GYPB-215ENST00000513677 ABHD8Q96I13 439 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 PHACTR3Q96KR7 559 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
GYPB-215ENST00000513677 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
GYPB-215ENST00000513677 WDR33Q9C0J8 1336 aaKnown RBP7.71□□□□□ -1.18
GYPB-215ENST00000513677 COL3A1P02461 1466 aaPredicted RBP7.7□□□□□ -1.18
GYPB-215ENST00000513677 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 TRAF5O00463 557 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 ATP9BO43861 1147 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 SNRPA1P09661 255 aaKnown RBP7.7□□□□□ -1.18
GYPB-215ENST00000513677 CTSOP43234 321 aaPredicted RBP7.7□□□□□ -1.18
GYPB-215ENST00000513677 EIF6P56537 245 aaKnown RBP7.7□□□□□ -1.18
GYPB-215ENST00000513677 HLFQ16534 295 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 CYP4F22Q6NT55 531 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 SLC51AQ86UW1 340 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 PNMA8AQ86V59 439 aaPredicted RBP7.7□□□□□ -1.18
GYPB-215ENST00000513677 RAB6BQ9NRW1 208 aa7.7□□□□□ -1.18
GYPB-215ENST00000513677 ADAMTSL1Q8N6G6 1762 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 A0A1W2PRU2 124 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 MEN1O00255 615 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 MAN1A2O60476 641 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
GYPB-215ENST00000513677 GPTP24298 496 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 ALDH1B1P30837 517 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.18
GYPB-215ENST00000513677 MAP2K1Q02750 393 aaPredicted RBP7.69□□□□□ -1.18
GYPB-215ENST00000513677 NBPF10Q6P3W6 841 aaKnown RBP7.69□□□□□ -1.18
GYPB-215ENST00000513677 USP17L2Q6R6M4 530 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 CLEC4GQ6UXB4 293 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 GPC2Q8N158 579 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 LARGE2Q8N3Y3 721 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 NBPF15Q8N660 670 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 RPGRQ92834 1020 aaKnown RBP7.69□□□□□ -1.18
GYPB-215ENST00000513677 CAPNS2Q96L46 248 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 CFAP53Q96M91 514 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 MIS18AQ9NYP9 233 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
GYPB-215ENST00000513677 DNMT3LQ9UJW3 386 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 ABCC12Q96J65 1359 aa7.69□□□□□ -1.18
GYPB-215ENST00000513677 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
GYPB-215ENST00000513677 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 FZD9O00144 591 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 LZTS3O60299 673 aaPredicted RBP7.68□□□□□ -1.18
GYPB-215ENST00000513677 AOC2O75106 756 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 STAU1O95793 577 aaKnown RBP7.68□□□□□ -1.18
GYPB-215ENST00000513677 GNRH1P01148 92 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 MYL6BP14649 208 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 EPS15P42566 896 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 FOXD4L5Q5VV16 416 aaPredicted RBP7.68□□□□□ -1.18
GYPB-215ENST00000513677 DDX21Q9NR30 783 aaKnown RBP eCLIP7.68□□□□□ -1.18
GYPB-215ENST00000513677 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 RRP7AQ9Y3A4 280 aaKnown RBP7.68□□□□□ -1.18
GYPB-215ENST00000513677 CEMIPQ8WUJ3 1361 aa7.68□□□□□ -1.18
GYPB-215ENST00000513677 COL4A5P29400 1685 aa7.67□□□□□ -1.18
GYPB-215ENST00000513677 LTBP1Q14766 1721 aa7.67□□□□□ -1.18
GYPB-215ENST00000513677 TRPM7Q96QT4 1865 aa7.67□□□□□ -1.18
GYPB-215ENST00000513677 ECE1P42892 770 aa7.67□□□□□ -1.18
GYPB-215ENST00000513677 KIF6Q6ZMV9 814 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms