RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ARHGEF6Q15052 776 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 FTSJ3Q8IY81 847 aaKnown RBP9.02□□□□□ -0.97
HTT-212ENST00000513639 FAM151AQ8WW52 585 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 CLUAP1Q96AJ1 413 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
HTT-212ENST00000513639 NEUROD6Q96NK8 337 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 USP40Q9NVE5 1235 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 FZD1Q9UP38 647 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 AOX1Q06278 1338 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 CASP8AP2Q9UKL3 1982 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 LDHCP07864 332 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 MS4A1P11836 297 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 PHKA1P46020 1223 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 ATP8B2P98198 1209 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
HTT-212ENST00000513639 TFCP2Q12800 502 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
HTT-212ENST00000513639 ERO1BQ86YB8 467 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.97
HTT-212ENST00000513639 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
HTT-212ENST00000513639 PDS5AQ29RF7 1337 aaKnown RBP9.01□□□□□ -0.97
HTT-212ENST00000513639 MAP4K4O95819 1239 aaPredicted RBP9□□□□□ -0.97
HTT-212ENST00000513639 UQCRFS1P1P0C7P4 283 aa9□□□□□ -0.97
HTT-212ENST00000513639 CETPP11597 493 aa9□□□□□ -0.97
HTT-212ENST00000513639 CACNB3P54284 484 aa9□□□□□ -0.97
HTT-212ENST00000513639 GSTO1P78417 241 aa9□□□□□ -0.97
HTT-212ENST00000513639 VGLL4Q14135 290 aa9□□□□□ -0.97
HTT-212ENST00000513639 CDC42EP5Q6NZY7 148 aa9□□□□□ -0.97
HTT-212ENST00000513639 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
HTT-212ENST00000513639 DZIP1Q86YF9 867 aaKnown RBP9□□□□□ -0.97
HTT-212ENST00000513639 TMEM57Q8N5G2 664 aa9□□□□□ -0.97
HTT-212ENST00000513639 ZNF341Q9BYN7 854 aa9□□□□□ -0.97
HTT-212ENST00000513639 GPR108Q9NPR9 543 aa9□□□□□ -0.97
HTT-212ENST00000513639 ABCF2Q9UG63 623 aa9□□□□□ -0.97
HTT-212ENST00000513639 DAGLAQ9Y4D2 1042 aa9□□□□□ -0.97
HTT-212ENST00000513639 IGSF3O75054 1194 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 ENTPD3O75355 529 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 PRDX5P30044 214 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 ADORA1P30542 326 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 PPATQ06203 517 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 OS9Q13438 667 aaPredicted RBP8.99□□□□□ -0.97
HTT-212ENST00000513639 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 DIXDC1Q155Q3 683 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 CCDC158Q5M9N0 1113 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 FBXO46Q6PJ61 603 aaPredicted RBP8.99□□□□□ -0.97
HTT-212ENST00000513639 MIGA2Q7L4E1 593 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 ERO1AQ96HE7 468 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 WRNIP1Q96S55 665 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 ZCCHC17Q9NP64 241 aaKnown RBP8.99□□□□□ -0.97
HTT-212ENST00000513639 AKAP11Q9UKA4 1901 aa8.99□□□□□ -0.97
HTT-212ENST00000513639 CCL15-CCL14A0A0B4J2E2 113 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 SPDYE5A6NIY4 337 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
HTT-212ENST00000513639 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
HTT-212ENST00000513639 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
HTT-212ENST00000513639 GJA5P36382 358 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 SP3Q02447 781 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 TCP10Q12799 353 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 CCL15Q16663 113 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 ITPRIPQ8IWB1 547 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 CDAN1Q8IWY9 1227 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 SPATA5Q8NB90 893 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 SSH3Q8TE77 659 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 ZKSCAN4Q969J2 545 aaPredicted RBP8.98□□□□□ -0.97
HTT-212ENST00000513639 OTUD5Q96G74 571 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 PTPN18Q99952 460 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 IDI2Q9BXS1 227 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 R3HDMLQ9H3Y0 253 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 CHMP4BQ9H444 224 aaKnown RBP8.98□□□□□ -0.97
HTT-212ENST00000513639 ZNF112Q9UJU3 913 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 ZBED9Q6R2W3 1325 aa8.98□□□□□ -0.97
HTT-212ENST00000513639 GPR75-ASB3A0A0A6YYF3 556 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 PNMA6EA0A0J9YXQ4 647 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 CRHR2Q13324 411 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 PPIL2Q13356 520 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 ZSCAN29Q8IWY8 852 aaPredicted RBP8.97□□□□□ -0.97
HTT-212ENST00000513639 BRI3BPQ8WY22 251 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 NOL10Q9BSC4 688 aaKnown RBP8.97□□□□□ -0.97
HTT-212ENST00000513639 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 RAI14Q9P0K7 980 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 HMG20BQ9P0W2 317 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 LRP2BPQ9P2M1 347 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 FAM198AQ9UFP1 575 aa8.97□□□□□ -0.97
HTT-212ENST00000513639 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
HTT-212ENST00000513639 RPAP1Q9BWH6 1393 aaPredicted RBP8.97□□□□□ -0.97
HTT-212ENST00000513639 SSC5DA1L4H1 1573 aa8.96□□□□□ -0.97
HTT-212ENST00000513639 CXCL11O14625 94 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 IRF6O14896 467 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 BAG3O95817 575 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 PLCG2P16885 1265 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
HTT-212ENST00000513639 RGS3P49796 1198 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms