RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SLAIN1Q8ND83 568 aa13.89□□□□□ -0.19
DDX41-216ENST00000513562 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
DDX41-216ENST00000513562 SGPL1O95470 568 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 BCRP11274 1271 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 INPP5BP32019 993 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
DDX41-216ENST00000513562 FCGRTP55899 365 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 APOBEC3HQ6NTF7 200 aaKnown RBP13.88□□□□□ -0.19
DDX41-216ENST00000513562 FBXO33Q7Z6M2 555 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 LRCH3Q96II8 777 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 MRIQ9BWK5 157 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 ZNF341Q9BYN7 854 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
DDX41-216ENST00000513562 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
DDX41-216ENST00000513562 GRM8O00222 908 aa13.87□□□□□ -0.19
DDX41-216ENST00000513562 EVI5O60447 810 aa13.87□□□□□ -0.19
DDX41-216ENST00000513562 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
DDX41-216ENST00000513562 PARK7Q99497 189 aaKnown RBP13.87□□□□□ -0.19
DDX41-216ENST00000513562 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
DDX41-216ENST00000513562 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
DDX41-216ENST00000513562 F6X3S4 739 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 CAPN2P17655 700 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 MIGA2Q7L4E1 593 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
DDX41-216ENST00000513562 GABRQQ9UN88 632 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
DDX41-216ENST00000513562 MAST3O60307 1309 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 IL16Q14005 1332 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 MROH5Q6ZUA9 1318 aa13.86□□□□□ -0.19
DDX41-216ENST00000513562 NOL9Q5SY16 702 aaKnown RBP13.85□□□□□ -0.19
DDX41-216ENST00000513562 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
DDX41-216ENST00000513562 STAP2Q9UGK3 403 aa13.85□□□□□ -0.19
DDX41-216ENST00000513562 SUGT1Q9Y2Z0 365 aa13.85□□□□□ -0.19
DDX41-216ENST00000513562 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
DDX41-216ENST00000513562 INHAP05111 366 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 CYP2C8P10632 490 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 PXYLP1Q8TE99 480 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 FAM151AQ8WW52 585 aa13.84□□□□□ -0.19
DDX41-216ENST00000513562 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
DDX41-216ENST00000513562 CXCL11O14625 94 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 ADCY3O60266 1144 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 VAMP4O75379 141 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 FRAT2O75474 233 aaPredicted RBP13.83□□□□□ -0.2
DDX41-216ENST00000513562 ELNP15502 786 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 BMP8BP34820 402 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 FLT3LGP49771 235 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 IRF5Q13568 498 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 VGLL2Q8N8G2 317 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 KAZALD1Q96I82 304 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 DEFB118Q96PH6 123 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 GDF15Q99988 308 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
DDX41-216ENST00000513562 UNC80Q8N2C7 3258 aa13.82□□□□□ -0.2
DDX41-216ENST00000513562 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
DDX41-216ENST00000513562 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
DDX41-216ENST00000513562 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
DDX41-216ENST00000513562 A0A0G2JLL6 359 aaPredicted RBP13.81□□□□□ -0.2
DDX41-216ENST00000513562 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
DDX41-216ENST00000513562 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
DDX41-216ENST00000513562 PRRT2Q7Z6L0 340 aaPredicted RBP13.81□□□□□ -0.2
DDX41-216ENST00000513562 DEFB123Q8N688 67 aa13.81□□□□□ -0.2
DDX41-216ENST00000513562 PAWRQ96IZ0 340 aaKnown RBP13.81□□□□□ -0.2
DDX41-216ENST00000513562 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
DDX41-216ENST00000513562 CUL9Q8IWT3 2517 aa13.81□□□□□ -0.2
DDX41-216ENST00000513562 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
DDX41-216ENST00000513562 PDE8BO95263 885 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 BCAMP50895 628 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 TCP10Q12799 353 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 NFIAQ12857 509 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
DDX41-216ENST00000513562 CDC42EP5Q6NZY7 148 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 FASTKD5Q7L8L6 764 aaKnown RBP13.8□□□□□ -0.2
DDX41-216ENST00000513562 NECAB2Q7Z6G3 386 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 SLC45A1Q9Y2W3 748 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 DAGLAQ9Y4D2 1042 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
DDX41-216ENST00000513562 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
DDX41-216ENST00000513562 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
DDX41-216ENST00000513562 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
DDX41-216ENST00000513562 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
DDX41-216ENST00000513562 SRCIN1Q9C0H9 1055 aa13.79□□□□□ -0.2
DDX41-216ENST00000513562 FAM198AQ9UFP1 575 aa13.79□□□□□ -0.2
DDX41-216ENST00000513562 PHF20L1A8MW92 1017 aa13.78□□□□□ -0.2
DDX41-216ENST00000513562 NBPF7P0C2Y1 421 aaPredicted RBP13.78□□□□□ -0.2
DDX41-216ENST00000513562 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
DDX41-216ENST00000513562 Q7L0L9 218 aa13.78□□□□□ -0.2
DDX41-216ENST00000513562 C7orf61Q8IZ16 206 aa13.78□□□□□ -0.2
DDX41-216ENST00000513562 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
DDX41-216ENST00000513562 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX41-216ENST00000513562 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
DDX41-216ENST00000513562 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms