RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SLC39A6Q13433 755 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 OCLNQ16625 522 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 DEFB115Q30KQ5 88 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 TBC1D9BQ66K14 1250 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
HTT-211ENST00000513326 CAPNS2Q96L46 248 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 NARFQ9UHQ1 456 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 ABT1Q9ULW3 272 aaKnown RBP6.64□□□□□ -1.35
HTT-211ENST00000513326 RNF123Q5XPI4 1314 aa6.64□□□□□ -1.35
HTT-211ENST00000513326 STAU1O95793 577 aaKnown RBP6.63□□□□□ -1.35
HTT-211ENST00000513326 TIMP2P16035 220 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 WEE1P30291 646 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 EPHX2P34913 555 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 MTHFSP49914 203 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 SOX10P56693 466 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 SCN7AQ01118 1682 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 CBLBQ13191 982 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 PRR5LQ6MZQ0 368 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
HTT-211ENST00000513326 CNTROBQ8N137 903 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 XAGE2Q96GT9 111 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 PRIMPOLQ96LW4 560 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
HTT-211ENST00000513326 ZFAND3Q9H8U3 227 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 ZNF277Q9NRM2 450 aaPredicted RBP6.63□□□□□ -1.35
HTT-211ENST00000513326 LTBP3Q9NS15 1303 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
HTT-211ENST00000513326 SERTAD1Q9UHV2 236 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 SCN11AQ9UI33 1791 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 IVNS1ABPQ9Y6Y0 642 aa6.63□□□□□ -1.35
HTT-211ENST00000513326 ARFGEF2Q9Y6D5 1785 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 A0A1W2PRU2 124 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 CANXP27824 592 aaKnown RBP6.62□□□□□ -1.35
HTT-211ENST00000513326 MAP2K1Q02750 393 aaPredicted RBP6.62□□□□□ -1.35
HTT-211ENST00000513326 CST9Q5W186 159 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 TAS1R3Q7RTX0 852 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 KDF1Q8NAX2 398 aaPredicted RBP6.62□□□□□ -1.35
HTT-211ENST00000513326 C7orf43Q8WVR3 580 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 ZIC5Q96T25 663 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 LGR6Q9HBX8 967 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 DDX21Q9NR30 783 aaKnown RBP eCLIP6.62□□□□□ -1.35
HTT-211ENST00000513326 RAB6BQ9NRW1 208 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 HACL1Q9UJ83 578 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 MTMR7Q9Y216 660 aa6.62□□□□□ -1.35
HTT-211ENST00000513326 MRC1P22897 1456 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 IQCA1LA6NCM1 817 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 IL2RAP01589 272 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 HSP90AB1P08238 724 aaKnown RBP6.61□□□□□ -1.35
HTT-211ENST00000513326 IGFBP4P22692 258 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 PTGIRP43119 386 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 SMTNP53814 917 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 EPHA4P54764 986 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 CLN3Q13286 438 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 PLEKHO1Q53GL0 409 aaPredicted RBP6.61□□□□□ -1.35
HTT-211ENST00000513326 GAS2L2Q8NHY3 880 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 HPS1Q92902 700 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 CNKSR1Q969H4 720 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 GPR101Q96P66 508 aaPredicted RBP6.61□□□□□ -1.35
HTT-211ENST00000513326 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
HTT-211ENST00000513326 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
HTT-211ENST00000513326 A6NJY4 79 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 LGR5O75473 907 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 SRGNP10124 158 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 DGKZQ13574 1117 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 MTFR1Q15390 333 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 NLRP3Q96P20 1036 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 BRIP1Q9BX63 1249 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 HRH3Q9Y5N1 445 aa6.6□□□□□ -1.35
HTT-211ENST00000513326 SNED1Q8TER0 1413 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 UBR2Q8IWV8 1755 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 CDK2AP1O14519 115 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 PDE6BP35913 854 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 EPS15P42566 896 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 EIF5P55010 431 aaKnown RBP6.59□□□□□ -1.35
HTT-211ENST00000513326 FOXK2Q01167 660 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 RELBQ01201 579 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 TLR1Q15399 786 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 TMCO4Q5TGY1 634 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 DLK2Q6UY11 383 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 MEIOBQ8N635 442 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 SCG3Q8WXD2 468 aaKnown RBP6.59□□□□□ -1.35
HTT-211ENST00000513326 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 TSPAN10Q9H1Z9 355 aaPredicted RBP6.59□□□□□ -1.35
HTT-211ENST00000513326 SLC52A2Q9HAB3 445 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 BCORQ6W2J9 1755 aa6.59□□□□□ -1.35
HTT-211ENST00000513326 TRPM7Q96QT4 1865 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 FZD9O00144 591 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 MEN1O00255 615 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 CAPN5O15484 640 aaPredicted RBP6.58□□□□□ -1.36
HTT-211ENST00000513326 CAMTA2O94983 1202 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 PIP4K2AP48426 406 aaPredicted RBP6.58□□□□□ -1.36
HTT-211ENST00000513326 FKBP4Q02790 459 aaKnown RBP eCLIP6.58□□□□□ -1.36
HTT-211ENST00000513326 CENPCQ03188 943 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 FKBP5Q13451 457 aaPredicted RBP6.58□□□□□ -1.36
HTT-211ENST00000513326 C1orf141Q5JVX7 400 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 CIAPIN1Q6FI81 312 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 STYK1Q6J9G0 422 aa6.58□□□□□ -1.36
HTT-211ENST00000513326 CNBD1Q8NA66 436 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms