RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MMP14P50281 582 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 SCNN1DP51172 638 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 TTF1Q15361 905 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 CERS5Q8N5B7 392 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 DPF2Q92785 391 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 GMLQ99445 158 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 DNAJC2Q99543 621 aaKnown RBP9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 SNRKQ9NRH2 765 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 GPRC5DQ9NZD1 345 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 ABCF2Q9UG63 623 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
HMGXB3-204ENST00000513318 IQCA1LA6NCM1 817 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 LDHBP07195 334 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 PRDX5P30044 214 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 TMED8Q6PL24 325 aaPredicted RBP9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 OGFOD1Q8N543 542 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 MXD3Q9BW11 206 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 PAG1Q9NWQ8 432 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 HDAC9Q9UKV0 1011 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 TTF2Q9UNY4 1162 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 DDX60LQ5H9U9 1706 aaKnown RBP9.21□□□□□ -0.94
HMGXB3-204ENST00000513318 LAMA4Q16363 1823 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 H7C1D1 291 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 GOLIM4O00461 696 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 HDLBPQ00341 1268 aaKnown RBP9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 LHX8Q68G74 356 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 DZIP1Q86YF9 867 aaKnown RBP9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 LRP2BPQ9P2M1 347 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 HACL1Q9UJ83 578 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
HMGXB3-204ENST00000513318 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 IDH1O75874 414 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 YY1P25490 414 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 RGS3P49796 1198 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 ZNF280AP59817 542 aaPredicted RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 MECOMQ03112 1051 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 MAP3K12Q12852 859 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 GRIK5Q16478 980 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 TTC22Q5TAA0 569 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 TBC1D9Q6ZT07 1266 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 CNTROBQ8N137 903 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 KBTBD3Q8NAB2 608 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 NSUN4Q96CB9 384 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 EVI5LQ96CN4 794 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 PIH1D3Q9NQM4 214 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 ADARB2Q9NS39 739 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 RAI14Q9P0K7 980 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 SERPINA10Q9UK55 444 aa9.19□□□□□ -0.94
HMGXB3-204ENST00000513318 TRIM6-TRIM34B2RNG4 842 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 LDHCP07864 332 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 VEGFAP15692 232 aaPredicted RBP9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 EPHX2P34913 555 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 EPS15P42566 896 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 GSTO1P78417 241 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 KIF4BQ2VIQ3 1234 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 NAA16Q6N069 864 aaPredicted RBP9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 ZSCAN25Q6NSZ9 544 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 HHIPL2Q6UWX4 724 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 TICAM2Q86XR7 235 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 ATAD5Q96QE3 1844 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 MRIQ9BWK5 157 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 MYOZ2Q9NPC6 264 aa9.18□□□□□ -0.94
HMGXB3-204ENST00000513318 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 MROH7-TTC4A0A0A0MT08 1334 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 GAKO14976 1311 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 SHTN1A0MZ66 631 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 POTECB2RU33 542 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 ZFYP08048 801 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 ADD2P35612 726 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 CRKP46108 304 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 RBM5P52756 815 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 CFAP100Q494V2 611 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 USP50Q70EL3 339 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 MAGEB6Q8N7X4 407 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 ZNF526Q8TF50 670 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 ZDHHC15Q96MV8 337 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 FSD1Q9BTV5 496 aa9.17□□□□□ -0.94
HMGXB3-204ENST00000513318 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms