RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
SKP2-207ENST00000513263 ZNF341Q9BYN7 854 aa13.67□□□□□ -0.22
SKP2-207ENST00000513263 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
SKP2-207ENST00000513263 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
SKP2-207ENST00000513263 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
SKP2-207ENST00000513263 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
SKP2-207ENST00000513263 BCAMP50895 628 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 PRMT2P55345 433 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 SLF2Q8IX21 1173 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 CD99L2Q8TCZ2 262 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 DENND2AQ9ULE3 1009 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
SKP2-207ENST00000513263 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
SKP2-207ENST00000513263 PPATQ06203 517 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 APOBEC3HQ6NTF7 200 aaKnown RBP13.65□□□□□ -0.22
SKP2-207ENST00000513263 FAM151AQ8WW52 585 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 PTPN18Q99952 460 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
SKP2-207ENST00000513263 ATAD5Q96QE3 1844 aa13.64□□□□□ -0.23
SKP2-207ENST00000513263 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
SKP2-207ENST00000513263 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
SKP2-207ENST00000513263 KLHDC4Q8TBB5 520 aa13.64□□□□□ -0.23
SKP2-207ENST00000513263 TLR2O60603 784 aa13.63□□□□□ -0.23
SKP2-207ENST00000513263 GNAI3P08754 354 aa13.63□□□□□ -0.23
SKP2-207ENST00000513263 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
SKP2-207ENST00000513263 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
SKP2-207ENST00000513263 CACNB3P54284 484 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 GRIK5Q16478 980 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
SKP2-207ENST00000513263 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
SKP2-207ENST00000513263 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 COPRSQ9NQ92 184 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 DAGLAQ9Y4D2 1042 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 PHIPQ8WWQ0 1821 aa13.62□□□□□ -0.23
SKP2-207ENST00000513263 IRF6O14896 467 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 LACTBP83111 547 aaPredicted RBP13.61□□□□□ -0.23
SKP2-207ENST00000513263 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 DZIP1Q86YF9 867 aaKnown RBP13.61□□□□□ -0.23
SKP2-207ENST00000513263 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
SKP2-207ENST00000513263 FAM43AQ8N2R8 423 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 PARK7Q99497 189 aaKnown RBP13.61□□□□□ -0.23
SKP2-207ENST00000513263 SIL1Q9H173 461 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 ZSWIM8A7E2V4 1837 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 FOCADQ5VW36 1801 aa13.61□□□□□ -0.23
SKP2-207ENST00000513263 BTBD19C9JJ37 291 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
SKP2-207ENST00000513263 ENTPD3O75355 529 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 MAP4K4O95819 1239 aaPredicted RBP13.6□□□□□ -0.23
SKP2-207ENST00000513263 HOXD10P28358 340 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
SKP2-207ENST00000513263 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 ZKSCAN4Q969J2 545 aaPredicted RBP13.6□□□□□ -0.23
SKP2-207ENST00000513263 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
SKP2-207ENST00000513263 LRRFIP2Q9Y608 721 aaKnown RBP13.6□□□□□ -0.23
SKP2-207ENST00000513263 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
SKP2-207ENST00000513263 PRDX5P30044 214 aa13.59□□□□□ -0.23
SKP2-207ENST00000513263 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
SKP2-207ENST00000513263 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
SKP2-207ENST00000513263 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
SKP2-207ENST00000513263 GAKO14976 1311 aa13.59□□□□□ -0.23
SKP2-207ENST00000513263 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.23
SKP2-207ENST00000513263 CXCL11O14625 94 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 CAPN2P17655 700 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 MTX1Q13505 466 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 DIXDC1Q155Q3 683 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 SLC4A8Q2Y0W8 1093 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
SKP2-207ENST00000513263 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
SKP2-207ENST00000513263 PICK1Q9NRD5 415 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 USP40Q9NVE5 1235 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
SKP2-207ENST00000513263 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 IGSF3O75054 1194 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
SKP2-207ENST00000513263 PHKA1P46020 1223 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 GSTO1P78417 241 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 TCP10Q12799 353 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 SCYL3Q8IZE3 742 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
SKP2-207ENST00000513263 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 TBC1D2Q9BYX2 928 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 SLC45A1Q9Y2W3 748 aa13.57□□□□□ -0.24
SKP2-207ENST00000513263 PDHXO00330 501 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 INPP5BP32019 993 aa13.56□□□□□ -0.24
SKP2-207ENST00000513263 NFIAQ12857 509 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms