RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 UBE2Q2LH0YL09 131 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 ATG7O95352 703 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 GJA5P36382 358 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 FOSBP53539 338 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 CDCA7LQ96GN5 454 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 COLQQ9Y215 455 aaPredicted RBP7.54□□□□□ -1.2
GYPB-213ENST00000513128 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
GYPB-213ENST00000513128 H7C1W4 665 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 SNAP23O00161 211 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 SASH1O94885 1247 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 CCT4P50991 539 aaKnown RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 CASP7P55210 303 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 CDC5LQ99459 802 aaKnown RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 BSDC1Q9NW68 430 aaPredicted RBP7.53□□□□□ -1.2
GYPB-213ENST00000513128 SAGE1Q9NXZ1 904 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 FZD1Q9UP38 647 aa7.53□□□□□ -1.2
GYPB-213ENST00000513128 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
GYPB-213ENST00000513128 WNT10BO00744 389 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.21
GYPB-213ENST00000513128 SOX10P56693 466 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 GCKRQ14397 625 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 TWISTNBQ3B726 338 aaPredicted RBP7.52□□□□□ -1.21
GYPB-213ENST00000513128 PRPF38BQ5VTL8 546 aaKnown RBP7.52□□□□□ -1.21
GYPB-213ENST00000513128 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 LRRN4Q8WUT4 740 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 ADAM33Q9BZ11 813 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 GNEQ9Y223 722 aaKnown RBP7.52□□□□□ -1.21
GYPB-213ENST00000513128 PCDHAC2Q9Y5I4 1007 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 ECM29Q5VYK3 1845 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
GYPB-213ENST00000513128 TBC1D8O95759 1140 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 ITGA6P23229 1130 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 PRKG1Q13976 671 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 STRIP1Q5VSL9 837 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 ZBED3Q96IU2 234 aaPredicted RBP7.51□□□□□ -1.21
GYPB-213ENST00000513128 STK31Q9BXU1 1019 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 R3HDMLQ9H3Y0 253 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
GYPB-213ENST00000513128 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 ZNF804BA4D1E1 1349 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 AOX1Q06278 1338 aa7.51□□□□□ -1.21
GYPB-213ENST00000513128 TAF5LO75529 589 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 CSF1RP07333 972 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 FKBP1BP68106 108 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 GTF2IP78347 998 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 FOXO4P98177 505 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
GYPB-213ENST00000513128 CHRNDQ07001 517 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 TTLL5Q6EMB2 1281 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 TBC1D9Q6ZT07 1266 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 CTU1Q7Z7A3 348 aaKnown RBP7.5□□□□□ -1.21
GYPB-213ENST00000513128 HELBQ8NG08 1087 aaPredicted RBP7.5□□□□□ -1.21
GYPB-213ENST00000513128 HLA-CQ95604 372 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 PLA2G12BQ9BX93 195 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 COA1Q9GZY4 146 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 PCDHGC3Q9UN70 934 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 LAMB1P07942 1786 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
GYPB-213ENST00000513128 RBM47A0AV96 593 aaKnown RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 F6X3S4 739 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 VAMP4O75379 141 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 GUCA2AQ02747 115 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 EPHA10Q5JZY3 1008 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 ZNF454Q8N9F8 522 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 LINS1Q8NG48 757 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 DNAAF4Q8WXU2 420 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 CD209Q9NNX6 404 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 KIAA1522Q9P206 1035 aaPredicted RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 HPS5Q9UPZ3 1129 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 JAG2Q9Y219 1238 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 SALL2Q9Y467 1007 aaPredicted RBP7.49□□□□□ -1.21
GYPB-213ENST00000513128 MYO3BQ8WXR4 1341 aa7.49□□□□□ -1.21
GYPB-213ENST00000513128 OTOFQ9HC10 1997 aa7.48□□□□□ -1.21
GYPB-213ENST00000513128 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
GYPB-213ENST00000513128 TM4SF4P48230 202 aa7.48□□□□□ -1.21
GYPB-213ENST00000513128 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
GYPB-213ENST00000513128 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
GYPB-213ENST00000513128 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
GYPB-213ENST00000513128 CLMNQ96JQ2 1002 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms