RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 CDC5LQ99459 802 aaKnown RBP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 PRKAG2Q9UGJ0 569 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 CHD9Q3L8U1 2897 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 PDE8AO60658 829 aa12.28□□□□□ -0.44
CLCN3-208ENST00000512813 FOXK2Q01167 660 aa12.28□□□□□ -0.44
CLCN3-208ENST00000512813 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
CLCN3-208ENST00000512813 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-208ENST00000512813 GAS2L1Q99501 681 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-208ENST00000512813 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
CLCN3-208ENST00000512813 TCP10L2B9ZVM9 353 aa12.27□□□□□ -0.45
CLCN3-208ENST00000512813 DNAJB2P25686 324 aa12.27□□□□□ -0.45
CLCN3-208ENST00000512813 NHLH1Q02575 133 aa12.27□□□□□ -0.45
CLCN3-208ENST00000512813 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-208ENST00000512813 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
CLCN3-208ENST00000512813 ZNF576Q9H609 170 aa12.26□□□□□ -0.45
CLCN3-208ENST00000512813 TRIB2Q92519 343 aa12.25□□□□□ -0.45
CLCN3-208ENST00000512813 HOOK2Q96ED9 719 aa12.25□□□□□ -0.45
CLCN3-208ENST00000512813 SERPINA10Q9UK55 444 aa12.25□□□□□ -0.45
CLCN3-208ENST00000512813 NUDCQ9Y266 331 aa12.25□□□□□ -0.45
CLCN3-208ENST00000512813 FRMPD3Q5JV73 1810 aa12.25□□□□□ -0.45
CLCN3-208ENST00000512813 FAM86C2PA6NEL3 165 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 REV3LO60673 3130 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 PCCAP05165 728 aaPredicted RBP12.24□□□□□ -0.45
CLCN3-208ENST00000512813 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
CLCN3-208ENST00000512813 INPP5BP32019 993 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
CLCN3-208ENST00000512813 DCAF15Q66K64 600 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
CLCN3-208ENST00000512813 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
CLCN3-208ENST00000512813 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 SLC45A1Q9Y2W3 748 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 SPTBN4Q9H254 2564 aa12.24□□□□□ -0.45
CLCN3-208ENST00000512813 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 RPAP1Q9BWH6 1393 aaPredicted RBP12.23□□□□□ -0.45
CLCN3-208ENST00000512813 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 CXCL11O14625 94 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 IL1R1P14778 569 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 FAM110CQ1W6H9 321 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 LHX8Q68G74 356 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
CLCN3-208ENST00000512813 ZNF341Q9BYN7 854 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 GJD2Q9UKL4 321 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 CFAP54Q96N23 3096 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
CLCN3-208ENST00000512813 MYH3P11055 1940 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 CTSWP56202 376 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 RTP1P59025 263 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-208ENST00000512813 AAK1Q2M2I8 961 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 BADQ92934 168 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 SENP6Q9GZR1 1112 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-208ENST00000512813 ANKRD2Q9GZV1 360 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-208ENST00000512813 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
CLCN3-208ENST00000512813 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-208ENST00000512813 PRR33A8MZF0 331 aa12.21□□□□□ -0.45
CLCN3-208ENST00000512813 NOL9Q5SY16 702 aaKnown RBP12.21□□□□□ -0.45
CLCN3-208ENST00000512813 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
CLCN3-208ENST00000512813 FASTKD5Q7L8L6 764 aaKnown RBP12.21□□□□□ -0.45
CLCN3-208ENST00000512813 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-208ENST00000512813 TIFAQ96CG3 184 aa12.21□□□□□ -0.45
CLCN3-208ENST00000512813 PRDM12Q9H4Q4 367 aa12.21□□□□□ -0.45
CLCN3-208ENST00000512813 PTPRFP10586 1907 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-208ENST00000512813 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-208ENST00000512813 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-208ENST00000512813 KCNJ4P48050 445 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 KCNQ1P51787 676 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-208ENST00000512813 ADGRE1Q14246 886 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 FAM83AQ86UY5 434 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 ANKRD13CQ8N6S4 541 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.468e-7■■■■□ 19.3
CLCN3-208ENST00000512813 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 GREM2Q9H772 168 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 ZNF112Q9UJU3 913 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 TTF2Q9UNY4 1162 aaKnown RBP12.2□□□□□ -0.46
CLCN3-208ENST00000512813 MYO9BQ13459 2157 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 CHD7Q9P2D1 2997 aa12.2□□□□□ -0.46
CLCN3-208ENST00000512813 TFF2Q03403 129 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 LRRC37A2A6NM11 1700 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 RLFQ13129 1914 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 USP34Q70CQ2 3546 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 CACNA1BQ00975 2339 aa12.19□□□□□ -0.46
CLCN3-208ENST00000512813 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
CLCN3-208ENST00000512813 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
CLCN3-208ENST00000512813 ST18O60284 1047 aa12.18□□□□□ -0.46
CLCN3-208ENST00000512813 CCND3P30281 292 aaPredicted RBP12.18□□□□□ -0.46
CLCN3-208ENST00000512813 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
CLCN3-208ENST00000512813 CRKP46108 304 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms